Xiashengella succiniciproducens: M9189_03910
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Entry
M9189_03910 CDS
T08178
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
alkq
Xiashengella succiniciproducens
Pathway
alkq03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
alkq00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
M9189_03910 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
alkq03019
]
M9189_03910 (pnp)
03016 Transfer RNA biogenesis [BR:
alkq03016
]
M9189_03910 (pnp)
Enzymes [BR:
alkq01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
M9189_03910 (pnp)
Messenger RNA biogenesis [BR:
alkq03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
M9189_03910 (pnp)
Transfer RNA biogenesis [BR:
alkq03016
]
Prokaryotic type
tRNA degradation factors
M9189_03910 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
S1
RNase_PH_C
KH_1
PNPase
S1_RRP5
KH-I_KHDC4-BBP
S1_2
KH_KhpA-B
RRM_DEAH11
KH_Vigilin
Motif
Other DBs
NCBI-ProteinID:
URW80496
UniProt:
A0A9J6ZTA5
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All DBs
Position
complement(915162..917282)
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AA seq
706 aa
AA seq
DB search
MIKPIEKVIDLGDGRSIVIETGKLAKQADGAVVVRMGNTYLLATVVSAPDAKPGTDFMPL
TVEYKEKYSAAGRFPGGFQKREGRASDYEILVSRLIDRALRPLFPDDYHAETYVTVTLIS
ADKESTPDALAGLAASAAIAVSDIPFNGPISEVRVARIGGEWKINPVASLIKDADLDLIV
AASYDNIVMVEGEMKEVSEAELLEALKYAHDYIKIQCKAQIELAEMVGKTIKREYNHEDN
DEELREKIWKATYDKAYAVAKKANPNKQQRSADFAAVIDEWVAATYEGVDEDEIPADLIK
KYYHDVEKEAVRRLMLDEGIRLDGRRMNEIRPIWAEVDCLPGPHGSAIFTRGETQSLTTV
TLGTKLDEKIVDDVLNRTTDKFLLHYNFPPFSTNEAKAYRGVGRREIGHGNLALRALKPM
LPDNTPYAIRVVSDILESNGSSSMATVCAGTLALMDAGVQIKRPVSGIAMGLITDTKSDK
YVVLSDILGDEDHLGDMDFKVTGTEKGITATQMDIKVDGLSYEVLEKALNQAREGRMHIL
GKITEVIDKPRADYKPHAPRIVEIRIPKEMIGAVIGPGGKIIQEIQATTGTVIAITEEGQ
QGIVSVAADNKDAIDMALARINGIVAIPEVGKTYTGKVKSIVPFGAFVEILPGKDGLLHI
SEIDWKRVEKTEDYLKEGQIIDVKLIEIDDKSGKLKLSRKALIPRE
NT seq
2121 nt
NT seq
+upstream
nt +downstream
nt
atgattaaaccaattgaaaaagtaatcgatcttggcgatggaaggtcgatagtaattgaa
acaggtaaactggccaaacaggccgatggtgcagttgttgtgcgcatgggaaatacctat
ttgttggcaaccgttgtttcagcaccggacgcaaaacccggtactgattttatgccctta
actgtagaatataaggaaaagtattctgctgccggacgttttccgggcggctttcaaaag
agagaaggtcgtgcatccgactatgaaatattggtatcaaggcttatagaccgcgctttg
cgtcctctgttccccgatgattaccatgcagaaacttatgttaccgtgactttgatatcg
gctgacaaggaaagtacccctgatgctcttgctggacttgctgcatcagctgctattgcc
gtttccgacatcccattcaacggaccaatctcagaagttcgtgttgcaagaattggaggt
gagtggaaaatcaacccagttgcttcgctgattaaagatgcagatcttgacctgattgtt
gctgcatcttacgacaatatcgttatggttgagggcgagatgaaggaagtatcagaagct
gaacttctcgaggctctcaagtatgcacatgattatataaagattcaatgtaaagctcag
atcgaacttgctgagatggttggtaagaccataaaaagggaatacaaccacgaagacaac
gacgaagagctacgcgaaaagatctggaaggcaacatacgacaaggcctacgctgttgcc
aaaaaggcaaatcccaacaaacaacaacgcagtgctgattttgctgctgtgattgatgag
tgggtagcagcaacatatgagggtgtagacgaagatgagatccctgctgatcttataaag
aaatactaccatgatgtggaaaaggaggctgtcagaagacttatgcttgacgaaggcatc
cgtcttgacggccgtcgtatgaatgaaatcagacctatctgggctgaagttgactgtctg
ccaggtcctcacggttctgcaatctttacccgtggtgaaactcagtcattgactacagtt
acccttggtacaaaattggacgagaagatagttgacgatgtactcaaccgcacaacggac
aagttccttcttcactataacttcccaccgttctcaactaacgaagccaaagcatatcgt
ggagtaggacgtagggaaattggtcacggtaacctggctctcagggctctgaagccaatg
ttacctgataatacaccatatgcaatccgtgtggtatcagatatcctcgaatcaaacgga
tcatcttcaatggctactgtatgtgccggtactctggcattgatggatgctggtgttcag
atcaagcgccctgtatcaggtatagcaatgggtctgatcactgacaccaagtcagacaag
tatgtagttctatctgatattcttggtgatgaggaccaccttggtgatatggacttcaag
gtaaccggtactgaaaaaggtattaccgcaacccagatggatatcaaggttgacggtctt
tcttacgaagtacttgaaaaggctcttaaccaggcccgtgaaggtcgtatgcacatcctt
ggcaagattaccgaggttatcgacaaaccgcgtgccgactacaagcctcatgctccccga
attgtagaaatcaggattcctaaagaaatgatcggtgccgtaattggtcccggtggtaag
attatccaggaaatccaggctactaccggaactgttattgctattactgaagaaggacaa
caaggtatcgttagtgttgcagccgataacaaggacgcaatcgatatggcattggcccgt
atcaatggtattgttgcaattcctgaagttggcaagacatacacaggtaaggttaagtca
atagtacctttcggtgctttcgttgaaattctgcccggtaaggacggactgctgcacatc
tccgaaatagattggaagcgtgttgagaagaccgaagactacctgaaggaaggacaaata
attgatgttaagctaattgaaatcgacgataaatcaggtaagcttaagctatcaagaaag
gctcttatcccacgcgaatag
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