Xiashengella succiniciproducens: M9189_06830
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Entry
M9189_06830 CDS
T08178
Symbol
rny
Name
(GenBank) ribonuclease Y
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
alkq
Xiashengella succiniciproducens
Pathway
alkq03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
alkq00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
M9189_06830 (rny)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
alkq03019
]
M9189_06830 (rny)
Messenger RNA biogenesis [BR:
alkq03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
M9189_06830 (rny)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
HDOD
KH_KhpA-B
KH_2
KH-I_KHDC4-BBP
zf-C4H2
Motif
Other DBs
NCBI-ProteinID:
URW78577
UniProt:
A0A9J6ZLH7
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All DBs
Position
1614913..1616442
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AA seq
509 aa
AA seq
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MEIVIGISAFLFGGLVTWIAVTQAFKNRAKRIIREAENEAEVIKKEKMLQAKEKFLQLKA
EHEKEINSRNAKILALENKTKQRETAVAQRIEEYARKKKELDTVRENLDAQLEIVEKKNE
ELDRLHKQQVEQLEAISGMSAEEAREMLIESLKAEAKTEAMSYINDIMDEAKINASREAK
RIVLNTVQRVATETAIENAVTIFHIDSDEIKGRIIGREGRNIRALEAATGVEIIVDDTPE
AIVLSAFDPMRREIARLALHQLVTDGRIHPARIEEVVNKVRKQVEEEVIETGKRTAIDLG
VHGLHPELIKLVGKMKYRSSYGQNLLQHSRETANLCALMAAELGLNAKRAKRAGLLHDIG
KVSDEDPELPHAILGMKLAEKYKEKPDICNAIGAHHDEVEMTTMIAPIIQVCDAISGARP
GARREVVEAYIKRLNDLETLALSYPGVLKTYAIQAGRELRVIVGSEKVSDKEAEELSYDI
ARKIQTEMTYPGQVKITVIRETRAISIAK
NT seq
1530 nt
NT seq
+upstream
nt +downstream
nt
atggaaatagtaattggaatatcggcctttttatttggcggacttgtaacatggattgca
gtaacacaagcatttaagaaccgtgccaaaaggataatccgcgaggctgaaaatgaagct
gaagtcatcaagaaggaaaagatgcttcaggcaaaggaaaagtttctacagcttaaggct
gaacatgaaaaggaaataaacagcagaaatgcaaagatactggctttggaaaataagaca
aagcaaagagagactgctgttgcacagcgtattgaagagtatgcccgaaagaaaaaggaa
cttgatacagtacgcgaaaatctggatgctcaacttgaaatagtagaaaagaagaacgaa
gaattagatcgcctgcacaaacagcaggttgagcaacttgaagcaatctcaggtatgtct
gctgaagaggccagagagatgcttattgaatctttaaaggctgaggccaaaaccgaagca
atgtcatatatcaatgacattatggatgaagccaagattaatgcttcaagggaagccaag
cgtatagtactaaatactgtacaacgtgttgcaaccgaaactgcaattgaaaatgctgtt
actatcttccacattgattcggatgagattaaggggcgtatcattggtcgtgaaggtcgt
aatatcagggctcttgaggctgctacaggagttgagattattgtcgatgatactcctgag
gcaattgtcctttctgcattcgatccgatgcgcagggaaattgcccgtcttgcacttcat
caacttgtaactgacggacgtatccaccccgcaagaattgaagaggtggttaacaaggtt
cgcaagcaggtagaggaagaagtaatcgaaaccggtaagcgtactgcaatagacctggga
gtacacggtttgcatcccgagttgatcaagcttgttggtaaaatgaagtacaggtcttcc
tatggtcaaaacctgttacagcacagccgtgaaacagctaatctttgtgctttgatggct
gctgaacttggactaaatgccaagagggccaaacgtgccggtctgctacacgatattggt
aaagtatctgatgaggatccggaattaccacacgcaatcctgggtatgaagcttgcagag
aagtacaaggaaaaaccggatatctgcaacgctataggtgctcaccacgacgaggtagaa
atgactaccatgattgcaccaattattcaggtctgtgatgctatttcaggtgcacgtccg
ggagcccgccgtgaagttgtagaagcatatatcaagaggttgaacgacctggaaaccctt
gctttgagttatccgggtgttcttaagacctatgctattcaagctggtagggaactgcgt
gtaatcgtaggaagtgaaaaggtaagtgataaggaggctgaagagctgtcatacgatata
gccagaaagattcaaacagagatgacctatccaggccaggtaaagatcacagtaatcagg
gaaacgagagcaattagtattgcaaaataa
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