KEGG   Xiashengella succiniciproducens: M9189_06830
Entry
M9189_06830       CDS       T08178                                 
Symbol
rny
Name
(GenBank) ribonuclease Y
  KO
K18682  ribonucrease Y [EC:3.1.-.-]
Organism
alkq  Xiashengella succiniciproducens
Pathway
alkq03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:alkq00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    M9189_06830 (rny)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:alkq03019]
    M9189_06830 (rny)
Messenger RNA biogenesis [BR:alkq03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     M9189_06830 (rny)
SSDB
Motif
Pfam: RNase_Y_N HD KH_1 HDOD KH_KhpA-B KH_2 KH-I_KHDC4-BBP zf-C4H2
Other DBs
NCBI-ProteinID: URW78577
UniProt: A0A9J6ZLH7
LinkDB
Position
1614913..1616442
AA seq 509 aa
MEIVIGISAFLFGGLVTWIAVTQAFKNRAKRIIREAENEAEVIKKEKMLQAKEKFLQLKA
EHEKEINSRNAKILALENKTKQRETAVAQRIEEYARKKKELDTVRENLDAQLEIVEKKNE
ELDRLHKQQVEQLEAISGMSAEEAREMLIESLKAEAKTEAMSYINDIMDEAKINASREAK
RIVLNTVQRVATETAIENAVTIFHIDSDEIKGRIIGREGRNIRALEAATGVEIIVDDTPE
AIVLSAFDPMRREIARLALHQLVTDGRIHPARIEEVVNKVRKQVEEEVIETGKRTAIDLG
VHGLHPELIKLVGKMKYRSSYGQNLLQHSRETANLCALMAAELGLNAKRAKRAGLLHDIG
KVSDEDPELPHAILGMKLAEKYKEKPDICNAIGAHHDEVEMTTMIAPIIQVCDAISGARP
GARREVVEAYIKRLNDLETLALSYPGVLKTYAIQAGRELRVIVGSEKVSDKEAEELSYDI
ARKIQTEMTYPGQVKITVIRETRAISIAK
NT seq 1530 nt   +upstreamnt  +downstreamnt
atggaaatagtaattggaatatcggcctttttatttggcggacttgtaacatggattgca
gtaacacaagcatttaagaaccgtgccaaaaggataatccgcgaggctgaaaatgaagct
gaagtcatcaagaaggaaaagatgcttcaggcaaaggaaaagtttctacagcttaaggct
gaacatgaaaaggaaataaacagcagaaatgcaaagatactggctttggaaaataagaca
aagcaaagagagactgctgttgcacagcgtattgaagagtatgcccgaaagaaaaaggaa
cttgatacagtacgcgaaaatctggatgctcaacttgaaatagtagaaaagaagaacgaa
gaattagatcgcctgcacaaacagcaggttgagcaacttgaagcaatctcaggtatgtct
gctgaagaggccagagagatgcttattgaatctttaaaggctgaggccaaaaccgaagca
atgtcatatatcaatgacattatggatgaagccaagattaatgcttcaagggaagccaag
cgtatagtactaaatactgtacaacgtgttgcaaccgaaactgcaattgaaaatgctgtt
actatcttccacattgattcggatgagattaaggggcgtatcattggtcgtgaaggtcgt
aatatcagggctcttgaggctgctacaggagttgagattattgtcgatgatactcctgag
gcaattgtcctttctgcattcgatccgatgcgcagggaaattgcccgtcttgcacttcat
caacttgtaactgacggacgtatccaccccgcaagaattgaagaggtggttaacaaggtt
cgcaagcaggtagaggaagaagtaatcgaaaccggtaagcgtactgcaatagacctggga
gtacacggtttgcatcccgagttgatcaagcttgttggtaaaatgaagtacaggtcttcc
tatggtcaaaacctgttacagcacagccgtgaaacagctaatctttgtgctttgatggct
gctgaacttggactaaatgccaagagggccaaacgtgccggtctgctacacgatattggt
aaagtatctgatgaggatccggaattaccacacgcaatcctgggtatgaagcttgcagag
aagtacaaggaaaaaccggatatctgcaacgctataggtgctcaccacgacgaggtagaa
atgactaccatgattgcaccaattattcaggtctgtgatgctatttcaggtgcacgtccg
ggagcccgccgtgaagttgtagaagcatatatcaagaggttgaacgacctggaaaccctt
gctttgagttatccgggtgttcttaagacctatgctattcaagctggtagggaactgcgt
gtaatcgtaggaagtgaaaaggtaagtgataaggaggctgaagagctgtcatacgatata
gccagaaagattcaaacagagatgacctatccaggccaggtaaagatcacagtaatcagg
gaaacgagagcaattagtattgcaaaataa

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