Xiashengella succiniciproducens: M9189_09275
Help
Entry
M9189_09275 CDS
T08178
Name
(GenBank) RNA polymerase sigma factor RpoD/SigA
KO
K03086
RNA polymerase primary sigma factor
Organism
alkq
Xiashengella succiniciproducens
Pathway
alkq02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
alkq00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
M9189_09275
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
alkq03021
]
M9189_09275
Transcription machinery [BR:
alkq03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
M9189_09275
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r4
Sigma70_r2
Sigma70_r1_2
Sigma70_r4_2
HTH_10
PgaD
Motif
Other DBs
NCBI-ProteinID:
URW79044
UniProt:
A0A9J6ZMF0
LinkDB
All DBs
Position
2227395..2228261
Genome browser
AA seq
288 aa
AA seq
DB search
MRQLKITKQVTNREAPSLDKYLHEIGKVPLITAEEEVQLARKIRNGDEQALERLINANLR
FVVSVAKQYQNQGLSLPDLINEGNLGLIKAAQRFDETRGFKFISYAVWWIRQSILQALAE
QARIVRLPLNKIGSINKINNTFARLEQEFQREPTFNEIAEALDIAPKDVKEALKISSRHV
SMDAPLKADEENTLYDVLLHSESESPDSHLLDDSLRREIERSLSTLSPREADIVRLYYGL
NGEPPYSLEEIGKLFNLTRERVRQIKEKAIKRLRHTYRSKILKSYLGE
NT seq
867 nt
NT seq
+upstream
nt +downstream
nt
atgagacaactcaagataaccaagcaggtaaccaacagggaagctccctcattggacaag
tacttgcacgagattggaaaggtaccactgattactgcagaagaggaagtacaacttgca
agaaaaataaggaatggtgatgaacaggctctggaacgtctgatcaacgccaaccttaga
tttgtggtttcggttgcaaagcaatatcagaatcaaggacttagcctacccgacctgata
aacgaaggaaaccttggcctaatcaaggcagcccaaaggtttgacgagacccgtggattc
aagtttatctcctatgctgtttggtggattcgtcagtccatccttcaggcacttgctgaa
caggccaggatagtaagacttcctctgaacaagattggtagtattaataaaataaataat
acatttgcgcgactggaacaggagttccagcgcgagcctacatttaacgaaattgcagaa
gcactcgacatagctcccaaggatgtcaaggaagctctaaagatatcatcaagacacgtt
tccatggatgctccgcttaaggctgacgaggaaaatacactttatgatgtgctgctgcac
tccgaatcagagagtcccgattcacatctgctggacgactcactgcgtcgggaaatagaa
cgctcgctgtccacactctctccaagggaggctgatatcgtgaggctgtattatgggcta
aacggagaaccgccatattcacttgaagagattggaaaactctttaacctgacacgcgaa
agagtaagacagattaaggaaaaggcaataaaacgcctgagacacacttatagaagtaaa
atactgaaatcgtacctgggcgagtaa
DBGET
integrated database retrieval system
