Xiashengella succiniciproducens: M9189_11985
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Entry
M9189_11985 CDS
T08178
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
alkq
Xiashengella succiniciproducens
Pathway
alkq03030
DNA replication
alkq03430
Mismatch repair
alkq03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
alkq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
M9189_11985 (dnaE)
03430 Mismatch repair
M9189_11985 (dnaE)
03440 Homologous recombination
M9189_11985 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
alkq03032
]
M9189_11985 (dnaE)
03400 DNA repair and recombination proteins [BR:
alkq03400
]
M9189_11985 (dnaE)
Enzymes [BR:
alkq01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
M9189_11985 (dnaE)
DNA replication proteins [BR:
alkq03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
M9189_11985 (dnaE)
DNA repair and recombination proteins [BR:
alkq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
M9189_11985 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
HHH_6
PHP
DUF6346
Motif
Other DBs
NCBI-ProteinID:
URW79572
UniProt:
A0A9J6ZNT2
LinkDB
All DBs
Position
complement(2885654..2888593)
Genome browser
AA seq
979 aa
AA seq
DB search
MLLSLHSYYSLRYGTLSIEALIEGLTAYGYDTAVLTDINNSSAVIEFVRQCQKAGIKALA
GMEFRDNNKLLFTGIAKNNEGFRQLNQFMTGLNFRKAAPGARAPELPDCFVIYPFGTIKE
TELRDNEYIGVRTRELNRFLPSPRKYHDRYIAIHSVSFRREDYQLHRQLRSIDNNILISQ
LPDEQVASPDEVFISREKLMEAYAAEPRLVDNALRLLFQCGFDFDFSTSKNRSTFTGNRR
DDKRLLYRFAMDGLERRYGSGDEGARERVLRELDIIDKLNFSAYFLITDDICRYARSRNF
HYVGRGSGANSIVAYCLGITDVCPIELNLYFERFLNPKRQNPPDFDVDFSWRDRDHIYDY
IFRRYGSEHTALMGATSTFRDKSIIRELGKVYGLPKAEIDRLIYEPGNMLNKNEVCNTIL
TVYDSMADFPNQRTIHASGVLISDLPLCYYSAIDYPPKGLPTMQFDMYMADEMGFEKFDI
LSQRAIGHIKDCREIIRRNRGVTVDTSNPRRFFNDPQLGEQLRKANTIGCFYIESPAMRQ
LLTKLKCDNYLTLVAASSIIRPGVASSGMMQAYIERHFNPEKVKYIHPVFKEHLEETYGI
MVYQEDVMKIGHYFGGLDMADADVLRRMMSGKYRSAKHLEEIKDKFFGNCREKGYPEEVT
REVWRQMESFAGYSFNKAHSASFAVESYQSLYLKTYYPMEFMVSVLNNYGGFYSREVYVN
EARRAGANICLPCVNKSMFETSIEGNDIYLGFDCILNLENDLAHLIPEERRRNGDYQSLE
NFVLRTGAGLEQIIVLIRAGAFRFLGVDKKALLWEAHLLLNKTRGSQEQVVQLFGSGGST
VRLPALKTEFLEDLYDEIELLGFPVSGSMFDLAKSAYRGNAVARDLTELRGQVVRIVGKL
VATKPVKTKTGAYMKFGTFLDINGDFIDTVHFPQSLKKYPLYGQGLYLIEGRVMLDYGSP
SIDVQRCGMMPLKPDPRSV
NT seq
2940 nt
NT seq
+upstream
nt +downstream
nt
atgttgctgagtcttcatagttactacagcctcaggtacggtactctgagcatagaagcc
ctgatcgaaggtctgacggcttatgggtatgatactgctgtacttacggatatcaataac
tcatcggccgttattgagtttgtaaggcaatgccaaaaagcaggcatcaaggccctggcc
gggatggagtttagggataacaacaagttgctttttacaggtatagctaaaaataatgag
ggcttcaggcagcttaaccagtttatgacagggctcaacttccggaaagcggctccgggc
gcacgggcgccggagctacccgactgttttgtaatctacccctttggtacgataaaggag
actgagcttagggacaacgaatatattggggttaggacaagggaacttaaccgttttctg
ccttctcctagaaagtatcacgatcgttatatcgcaattcattcagtgtcttttcgcagg
gaggattatcagttgcaccgtcagcttagatccattgataacaatatcctgatatctcaa
ttgcctgatgaacaggttgctagtcctgatgaggtttttatctccagggaaaaactgatg
gaggcctatgctgccgaaccgcgacttgttgataatgcactgagactgctgtttcagtgc
ggctttgacttcgatttcagcacgagcaagaaccgaagcacctttacaggcaacaggagg
gatgataagcgccttttgtacaggtttgccatggatggtcttgagagacgctacggtagt
ggtgatgaaggggcaagggagagggtgctcagggaacttgatattatcgacaagctcaac
ttttcggcctacttccttattacagacgatatatgccgttatgcccgtagccgcaacttt
cactatgtggggcggggcagtggtgccaacagcatagtggcctactgtctggggattact
gatgtgtgtcccatagaactcaatctttacttcgagcgctttctgaatcccaagaggcag
aatccgccggacttcgatgtggatttctcgtggcgcgaccgcgatcatatctacgattat
atctttcgtcgctatggaagtgagcatacggcactgatgggagccacctctactttcagg
gataaatcgataatccgggaactgggcaaggtttacggcctgcccaaggcagagatagac
cgtcttatctatgagcctggcaatatgctcaacaagaacgaggtctgtaataccatcctg
acggtctatgacagtatggccgattttcccaatcagcgtacgatacatgcttcaggggta
ttgatatccgacctgccgctgtgttactactcggccatagactatccgcccaaggggctg
cccactatgcagtttgatatgtacatggccgacgagatgggttttgaaaaatttgatatc
ctgtcgcagcgggctatcggacatatcaaggattgcagggagattatcagacgcaaccgc
ggcgtcaccgttgacacctccaatcccaggcgctttttcaatgacccgcagttgggtgag
caactcaggaaagccaataccattggctgcttctatatcgagagtcctgcaatgcgtcag
ttgcttaccaagctcaaatgcgacaactatctcacactggtggcagccagttcgataatc
cgtcccggcgtggcaagctcaggcatgatgcaggcctatatcgaaaggcactttaatccg
gagaaagtaaagtacatacatccggtgttcaaggagcaccttgaagagacctatggcatc
atggtttatcaggaagatgtaatgaagataggacactactttggcggccttgacatggca
gatgctgatgtgttgaggcgtatgatgagtgggaagtatcgaagtgcaaagcacctggaa
gagataaaggataaattctttggtaactgcagggagaagggttatcccgaagaagtgaca
agggaggtatggcggcaaatggagtcatttgccggctatagcttcaataaggcgcacagc
gcatcctttgctgtggagagttatcagagtctttaccttaagacctactatcccatggag
tttatggtaagcgtgctcaataattacgggggtttttattcccgggaggtctatgtaaac
gaagcccgcagggcaggggccaatatatgtctgccctgtgtcaacaagagcatgtttgag
acaagtatcgagggcaatgatatttaccttggctttgactgcatactcaatcttgagaat
gacctggcacatcttatcccggaggaaaggagacgaaacggggactaccagagtcttgag
aattttgtgcttagaacaggggccggactggaacagataatagtgctgatacgtgctggg
gcttttcgttttcttggagtagataagaaggctttactctgggaagcccatttgttgctc
aacaagacgcggggatcccaggagcaggtggttcagttgtttggcagcggtggcagtacg
gtcaggcttccggcactgaaaacggaatttcttgaggacctctatgatgagatagagctg
ctgggctttcccgtttcagggtctatgtttgaccttgccaagtcagcatacaggggcaat
gctgttgccagagatctgactgaactcaggggtcaggttgtcaggatagttggcaagctt
gttgccactaagcctgtaaaaaccaaaacaggagcctatatgaagtttggtacctttctg
gatatcaacggtgactttatagataccgtgcacttcccgcagagcctgaagaaataccct
ctctatggtcagggactgtatctgatagagggaagggtgatgcttgattatggttcccca
tccattgatgtacaacgttgtggcatgatgcctttaaagcccgatccccggagtgtgtag
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