Allobaculum sp. Allo2: KWG61_04415
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Entry
KWG61_04415 CDS
T08047
Name
(GenBank) RecQ family ATP-dependent DNA helicase
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
allo
Allobaculum sp. Allo2
Pathway
allo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
allo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
KWG61_04415
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
allo03019
]
KWG61_04415
03400 DNA repair and recombination proteins [BR:
allo03400
]
KWG61_04415
Enzymes [BR:
allo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
KWG61_04415
Messenger RNA biogenesis [BR:
allo03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
KWG61_04415
DNA repair and recombination proteins [BR:
allo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
KWG61_04415
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RecQ_Zn_bind
RQC
ResIII
Motif
Other DBs
NCBI-ProteinID:
UNT94459
LinkDB
All DBs
Position
complement(789441..790742)
Genome browser
AA seq
433 aa
AA seq
DB search
MDLICALLDGRDVLGIMPTGAGKSVCYQIPAVFLPGITLVISPLISLMKDQVAALNQAGI
PAAFLNSSLNSGQYRKALYFASQGRYKIIYVAPERLLTPAFLNFAQSMNISMIAVDEAHC
VSQWGQNFRPSYLDIAEFAQKLPKRPILAAFTATATGPVKDDILHMLNLKDPKLLVTGFD
RPNLYFEVQQPRDKMKAIQYYLEEHPGQSGIIYCQTRKETEEVAQALCEAGFPCTRYHAG
LDDTERSRNQDDFQFDRVPLIAATSAFGMGINKSNVRFVIHYSLPQSLENYYQEAGRAGR
DGAPAECILLFAPADIMVSKFLIECSNEDNPDQERRDLHRLNQMVDYCKTTACLRATILS
YFGETSAGTCDNCSNCKGEWEDEDISQEAAKISKAIDAMPRAYGLNTVRDFLAGASTKKS
GKRISITSKATAV
NT seq
1302 nt
NT seq
+upstream
nt +downstream
nt
atcgatctgatctgcgcgctcttagacggccgcgatgtgctgggcattatgccgaccggc
gcaggcaagtcggtgtgctaccagatcccggcggtttttcttccgggaatcacgctggtc
atttcgccgctgatctcgctgatgaaagaccaggttgccgcgctgaaccaggccggcatt
cccgccgcgtttctgaacagctcgctcaattccggccagtatcgcaaagccctctatttc
gcttcgcagggccgctacaaaatcatttatgtggcaccggaacgtctgttaacgcccgcc
tttttaaactttgcgcagtcgatgaacatttccatgatcgcggtcgatgaagcgcactgc
gtgtcgcagtggggccagaacttccgtcccagctatctcgacattgccgaattcgcgcag
aagctgccgaaacgcccgattctcgcggcgtttaccgccacagccaccggaccggtcaag
gacgatatccttcacatgttaaatctgaaggatccaaaacttctcgtcaccggttttgac
cggccaaacctgtattttgaagtgcagcagccccgcgacaagatgaaagccatccagtat
tatcttgaggagcatcccggccagagcggcatcatctactgccagacacgcaaggaaacc
gaagaagtcgcgcaggcgctctgcgaagccggcttcccatgcacccgctatcatgccgga
ctcgatgatacggaacgctcccgcaaccaggacgatttccagtttgacagggttccgctc
attgcggcgacctccgcgtttggcatgggcatcaacaagtcgaacgtgcgctttgtcatt
cactattccctgccccagtcgcttgaaaactactatcaggaagcgggccgtgccggacgc
gacggcgctccggcggaatgcattttactgttcgcgccggccgacatcatggtcagcaag
tttctgattgaatgctccaacgaagacaatcccgatcaggagcggcgcgatctgcaccgt
ctgaaccagatggtcgactactgcaagacgaccgcctgcctgcgcgcgaccattctttcc
tattttggcgaaacgtctgcgggcacctgcgacaactgttccaactgcaaaggcgaatgg
gaagacgaagacatttcccaggaagcggcgaaaatttccaaggcgatcgacgcgatgccc
cgcgcctacggtctcaataccgtgcgcgattttcttgccggcgccagtacgaaaaaatcc
gggaagcgtatctcgatcacgtcgaaggctacggcagtctga
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