Allobaculum sp. Allo2: KWG61_06840
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Entry
KWG61_06840 CDS
T08047
Symbol
rny
Name
(GenBank) ribonuclease Y
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
allo
Allobaculum sp. Allo2
Pathway
allo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
allo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
KWG61_06840 (rny)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
allo03019
]
KWG61_06840 (rny)
Messenger RNA biogenesis [BR:
allo03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
KWG61_06840 (rny)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
HDOD
KH_KhpA-B
KH_2
Motif
Other DBs
NCBI-ProteinID:
UNT94305
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All DBs
Position
1242818..1244371
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AA seq
517 aa
AA seq
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MNALWISLSGIIGLVLGIGLMAALSKAGLNKNQQQANQILEQANREAEARLKQAVLDGKT
QVHDLKVEAEKEIKDRRQEAVDLENALLRREDSLNFRDQSLNQKEKELSAQMKKANDRLL
SLEDKEKQLQQEIDRQIEVLEGVARMTSQEAKDELFALVEKQMEHETMAYIKEKEDEAKS
QANQKAQEIIALSIERMAQQETMDRTVAVVQIPSEEMKGRIIGREGRNIRAFEQATGVEL
NIDDTPDLITITCFNPIRREVARLALEYLIRDGRIQPGRIEDAVKKFQHEVEAEILKAGE
ETVFKLGIGRIDREIVRLIGTLKYRFSYGQNALQHSIEVALIAGTMAAELGLNQHMAKRA
GLLHDIGKALNVDQQEGSHVELGYKFCKKHGEKEIVLNAIASHHGDTEPKFLTSHLVIAA
DTISAARPGARKESAQAYVERLENLEKIANEFEGVSNAYAIQAGREIRIMVVPEQVSDTA
CVKMARAIRDKIESELTYPGQIKVNVIREVRAQEIAK
NT seq
1554 nt
NT seq
+upstream
nt +downstream
nt
atgaatgccttatggatttctctatccgggataatcggacttgtcctgggaatcggcctg
atggccgctctttccaaagcaggtcttaacaaaaatcagcagcaggcaaatcagattctt
gaacaggcgaaccgcgaagcggaagccagactgaaacaggcagtacttgacgggaaaacc
caagtacacgatctgaaagtagaagcagaaaaggaaattaaggaccgccggcaggaagcc
gtcgatcttgaaaacgcccttctgcgtcgtgaagacagcttaaatttccgcgatcagtct
ctgaaccagaaggagaaggaactgagcgcgcagatgaagaaggccaatgatcgccttctt
tccttagaagataaggaaaagcagcttcagcaggaaattgaccgacagatcgaagtcctc
gagggcgtagcccggatgaccagtcaggaagcgaaagacgagctcttcgcccttgtcgaa
aagcagatggaacacgaaacgatggcttacatcaaggaaaaagaagatgaagccaaatcg
caggcgaaccagaaagcgcaggaaatcatcgccttaagcatcgaacgcatggcccagcag
gaaacgatggaccgtacggtcgctgtcgtccagattcccagtgaagaaatgaagggaaga
attatcggacgtgagggccgcaatatccgtgcctttgaacaggccacgggtgttgagctg
aacattgatgatacgccggatctgatcaccattacctgcttcaacccgattcgtcgagaa
gtggccagactcgccctcgaatatctcattcgagacggacgcatccagcccggacgaatt
gaggacgccgttaagaaattccagcatgaagtcgaggctgagattctcaaggccggcgaa
gaaactgtattcaagcttggcatcggccgcatcgatcgcgaaatcgttcgtctgatcggt
acgctgaaataccgtttctcctatggccagaatgcgctccagcattccattgaagtcgcc
ctgattgccggaacgatggcagctgagctggggctcaaccagcatatggcgaaacgtgcc
ggtcttctgcacgacatcggtaaagcactcaatgtcgaccagcaggaaggcagccacgtg
gagctgggttacaaattctgcaagaagcatggtgaaaaagaaatcgttcttaatgcgatc
gcatctcatcatggcgataccgaaccaaaattcctgacctcccatctggtcattgccgcc
gataccatttccgccgctcgcccaggagcccgtaaggaatccgcgcaggcctacgtggaa
cgtctcgaaaacctggaaaaaatcgccaatgaatttgaaggtgtgtccaacgcttatgcc
attcaagccggccgcgagatccgcatcatggttgttcccgaacaggtgagcgatacggcc
tgtgttaaaatggccagggcgatccgtgacaaaattgaatctgaactgacttatcccgga
cagatcaaagtgaacgtaattcgtgaagtccgtgcacaggaaatagcgaaataa
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