Algoriphagus sanaruensis: AO498_03355
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Entry
AO498_03355 CDS
T04334
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
alm
Algoriphagus sanaruensis
Pathway
alm03410
Base excision repair
alm03430
Mismatch repair
alm03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
alm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
AO498_03355
03430 Mismatch repair
AO498_03355
03440 Homologous recombination
AO498_03355
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
alm03400
]
AO498_03355
DNA repair and recombination proteins [BR:
alm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
AO498_03355
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
AO498_03355
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
AO498_03355
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
NinB
Motif
Other DBs
NCBI-ProteinID:
AMQ55421
UniProt:
A0A142EJW6
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All DBs
Position
758350..760074
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AA seq
574 aa
AA seq
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MEFVWKQKPKASQAAIERLGKEINVNPILANMLINRGIESFEQAKDYFRPSLSQLHDPFL
MKDMDHAVQRIQQAIQQEEKILVYGDYDVDGTTAVALMYSFLKGFYPHVEFYIPDRYKEG
YGISERGVRHAAENGFKLVIALDCGIKAIDKVRLAKELGVDFIICDHHTPGDQLPPAVAV
LDAKRVDCGYPYKELSGCGVGFKLIQAYAKASGIEESNLYSYLDLLVVSIAADIVPISGE
NRILAYYGLDRINNTPRPGLKALILQAKVEKEIQISDIVFKIGPRINASGRLEHAQASVE
LLISSNLDEAIERAKLVDEVNATRRNFDENITKEAFAMLAEREEETEWKSTVLFKEDWHK
GVIGIVASRCIEKYYRPTIILTESNNKATGSARSVVDFDIYEAIAECSELLDQFGGHKYA
AGLTLSVENVPAFQAKFEQVVRSRIEEIHRKPVIEIDDVLLLDQINYKFYNILKQMAPFG
PGNTEPIFRITNVYADEVTVLKDKHLRFKIVQDGQVTTPVCLGFGMADRAKDPDLTTVNM
LRGKMRFDLLAEMRENFFRDKSSLQLYVKDIKFD
NT seq
1725 nt
NT seq
+upstream
nt +downstream
nt
atggagttcgtctggaaacaaaaacccaaagcatcgcaagctgctattgagcgattaggc
aaagagatcaatgttaacccgatattggccaatatgctgatcaatcgaggcattgagagc
tttgaacaagctaaagattatttccgaccaagtctaagtcagcttcatgatccatttctg
atgaaggatatggaccatgctgttcaaagaatccagcaagctatccagcaagaggaaaaa
attttagtatatggggattacgatgtggatggaaccactgctgtagccttgatgtacagt
tttttaaaggggttttatccgcatgtagaattttatatcccagatcgctacaaggaaggt
tatggcatttcagagcgaggggtacgtcatgcagccgaaaacggatttaagttggttatt
gctcttgactgtggaatcaaagccattgataaagttcgtcttgctaaggaactgggcgtg
gatttcatcatttgcgatcaccatacacccggtgatcagcttccgccagccgtagctgtc
ctagatgcaaaacgagtagattgtggatatccttataaagaactgagtggttgtggagtt
ggatttaaactgatccaggcttatgcaaaagcaagcggaattgaggagtctaacctgtat
tcttatttggatttattggtagtcagtattgctgctgacattgtccctatttctggagaa
aatcggattttggcttactatggccttgatcggatcaataatactcctcggcctggattg
aaggctttgattcttcaagccaaagtcgaaaaggaaattcaaatctctgatattgtcttc
aagatcggacccagaatcaacgcctcaggacgactagaacatgcgcaagcctccgtggag
ctgttgatttcttccaatcttgatgaagccatcgagcgagccaaattggtcgatgaggtg
aatgccactcgacgcaattttgatgaaaatattaccaaagaagcatttgcaatgcttgcc
gaacgtgaagaggagacagaatggaaatccaccgtactcttcaaagaagattggcataaa
ggcgtgattggaattgtagccagccgctgtatcgaaaaatattaccggcctaccatcatc
cttactgagtccaacaacaaagccacgggaagcgccagatcagtggtggattttgatatt
tacgaagcgattgccgaatgctccgaattgctggaccagtttggagggcacaagtatgcg
gcaggtcttactctatcagtggaaaatgtgcctgcctttcaggctaaattcgaacaagta
gtccgaagccgaattgaagagattcatcggaagcccgtcatcgaaatcgatgatgtattg
cttttggaccagatcaattacaaattctacaatatcctgaagcaaatggcaccatttggg
ccagggaacacggaacctattttcaggattaccaatgtgtacgccgatgaggttacagtt
ttgaaggacaaacatttgcgcttcaagattgtccaagacggtcaggtgaccactccggtt
tgtcttgggtttggcatggcagatcgcgccaaagatcctgatttgaccacagtcaatatg
ctaagagggaaaatgcgcttcgatttattggctgaaatgcgtgagaattttttccgtgac
aaaagcagtttgcaactctacgtgaaagacatcaaatttgactga
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