Algoriphagus sanaruensis: AO498_05015
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Entry
AO498_05015 CDS
T04334
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
alm
Algoriphagus sanaruensis
Pathway
alm03420
Nucleotide excision repair
alm03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
alm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
AO498_05015
03430 Mismatch repair
AO498_05015
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
alm03400
]
AO498_05015
Enzymes [BR:
alm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AO498_05015
DNA repair and recombination proteins [BR:
alm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
AO498_05015
MMR (mismatch excision repair)
Other MMR factors
AO498_05015
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
Viral_helicase1
PcrA_UvrD_tudor
CowN
DEAD
DUF3553
ResIII
ERF
AAA_11
Motif
Other DBs
NCBI-ProteinID:
AMQ55759
UniProt:
A0A142EKV4
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All DBs
Position
1133526..1135790
Genome browser
AA seq
754 aa
AA seq
DB search
MDYLKELNPPQREAVERTDGPVMIIAGAGSGKTRVLTYRIAHLIYSKGIDPFHILSLTFT
NKAASEMKHRIEKLVGLEARNTWMGTFHSIFAKILRVESDKIGYPSNFTIYDTDDSKSLI
RTLVKEMRLDDKVYKPSVVLSRISGAKNRLISWSAYQADPFVRADDEAAMRPRMGEIYQK
YQDRLFKAGAMDFDDLLFNTNVLFRDHVDVLNKYQQRFKYVMVDEFQDTNVSQYLITKKL
ASVHQNICVVGDDAQSIYAFRGADIQNILNFEKDYPDLFVVKLEQNYRSTKTIVEAANSI
IDKNKAQLKKTVWTSNPDGELIELIKATSDNEEGRIVATTIFEEKNNKKLNNSDFAILYR
TNSQSRAIEEALRKMNLTYKIVGGLSFYQRKEIKDLMAYLRFAVNPADEEAFKRIINYPK
RGIGDTSVEKMLVAAYDHDTPLWEVVQNAHSFLGGKAGSAVDDFATMIKAFQIDIERKDA
YEVANNVAKQTGLLRELYEDKTIEGLNRYENVQELLNAIKEYVDNPENEDKSLGSFLQEI
ALLTDNDQDKDQTDAITLMTIHSSKGLEFKQVFVVGMEEDLFPSQMMMQSREDLEEERRL
FYVATTRAMEKLYLTYALTRYRFGRLLNCEPSRFLEEIDGSRIKVNKKMTATREMPGALR
REGLPGSQGFIGIKKAQPETRQPIQMKIHTPSPDFKPSNTNNLQAEQLVEHPKFGFGKVQ
KIETEGLNRKATIQFEHFGEKTLLLSFAKLRIID
NT seq
2265 nt
NT seq
+upstream
nt +downstream
nt
atggattacctcaaagaactcaatcctcctcaacgagaagccgtagaacggactgacggt
ccggtgatgattattgcgggtgctggctctggcaaaactcgtgtcttgacctaccggatt
gctcatttgatttattccaaaggcattgatccatttcatattttgtccttgacgtttacg
aacaaggctgccagtgagatgaagcatcggatcgaaaaattggtcggtctggaagctcgg
aatacctggatgggtacttttcactcgatttttgcaaaaatcctccgggtagaatccgac
aagattgggtatccttccaactttacgatttacgatacagacgattccaaatccctgatc
cgaaccttggtcaaagaaatgcgcctagatgacaaggtctataagccaagtgtggttctt
tcccgaatttcaggtgccaaaaaccggcttatttcctggtcagcttatcaagcggatccc
tttgttcgagcagatgatgaggcggcgatgcgaccaaggatgggggagatttatcaaaag
taccaagaccggttatttaaagctggagctatggactttgatgatttgttgttcaatacg
aatgtcctgtttcgggaccatgtggacgttttgaacaaatatcaacagcggttcaagtac
gtcatggtggatgagtttcaggataccaacgtctcccaatacctcatcaccaaaaaacta
gcctcagtccatcaaaatatctgtgtggtaggggatgatgcacagagtatttatgcgttt
cgtggggcagatattcagaatattctcaattttgaaaaggactatccagaccttttcgtg
gttaaactggagcaaaattaccgctccaccaagaccattgtggaagctgcaaactcaatc
atcgataaaaataaagcccaactcaaaaagaccgtttggacctcaaatcctgatggagag
ttgatcgagttgatcaaagccacctccgacaacgaggaagggagaattgtggcgactacc
atttttgaggaaaaaaataacaagaaactcaacaacagcgattttgcgattctttatcga
accaattcccagtcaagggcaattgaagaagcgcttcgcaaaatgaatttgacctataaa
attgtcgggggtctttctttctaccaacgaaaagaaatcaaagacctcatggcatacctc
cgattcgcagtcaatccagcagatgaggaggcattcaagcgaatcatcaattatccaaaa
cggggaattggggatacgtctgtagagaaaatgcttgtcgcagcctatgatcatgacaca
ccgctttgggaggtagttcaaaatgcccatagctttttgggcggaaaagccggaagtgct
gtggatgattttgccacgatgatcaaggctttccagatcgatattgagcgaaaggatgcc
tacgaggtagccaacaatgtcgccaagcaaaccggactccttcgcgaactgtatgaagac
aaaaccatcgaaggactcaaccgctacgaaaacgtccaggagcttttgaacgccatcaaa
gaatatgtcgacaatcctgaaaatgaggataaaagcttggggtccttccttcaggaaatt
gccttgttgaccgacaatgaccaagacaaagaccagacggacgctattaccttaatgacc
attcactcttcgaagggactggagtttaagcaggtttttgtggtgggaatggaagaggat
ttatttccttcccaaatgatgatgcaaagtcgggaagatttggaggaggagaggagactt
ttctatgtcgcgactacccgtgcgatggaaaaactgtacctgacctatgccttgacccgg
tatcggtttggccgattgctgaattgtgagccgagtcgatttttggaggaaatcgacggg
tcacggatcaaggtcaataaaaaaatgactgcaacccgtgaaatgccaggagcattgcgg
agagagggtttgccgggttctcaaggatttatcgggatcaaaaaagcccaacctgagact
cgacagccaatccaaatgaaaatccataccccaagtcctgatttcaaacctagcaacacc
aataatctccaagctgagcaattggtggagcatcccaaatttggttttggaaaagtacag
aaaattgaaaccgagggtcttaaccgtaaagcgaccatccaatttgagcattttggggag
aagacattattgcttagctttgccaagctcagaattatagactga
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