KEGG   Algoriphagus sanaruensis: AO498_06420
Entry
AO498_06420       CDS       T04334                                 
Name
(GenBank) signal recognition particle
  KO
K03106  signal recognition particle subunit SRP54 [EC:3.6.5.4]
Organism
alm  Algoriphagus sanaruensis
Pathway
alm02024  Quorum sensing
alm03060  Protein export
alm03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:alm00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03060 Protein export
    AO498_06420
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    AO498_06420
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    AO498_06420
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:alm02044]
    AO498_06420
Enzymes [BR:alm01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.5  Acting on GTP to facilitate cellular and subcellular movement
    3.6.5.4  signal-recognition-particle GTPase
     AO498_06420
Secretion system [BR:alm02044]
 Sec (secretion) system
  Prokaryotic Sec-SRP core components
   AO498_06420
  Eukaryotic Sec-SRP protein
   AO498_06420
SSDB
Motif
Pfam: SRP54 SRP_SPB SRP54_N CbiA AAA_22 AAA_16 nSTAND3 APS_kinase CLP1_P cobW Zeta_toxin MeaB KAP_NTPase AAA_30 ParA ATP_bind_1 NTPase_1 ATPase AAA_17 AAA_18 AAA_24 AAA_31 AAA_33 AAA_14 AAA_19 Thymidylate_kin YqeC KTI12 Fer4_NifH MobB T2SSE RHH_1 ABC_tran ATPase_2 NPHP3_N TsaE AAA_29 ArsA_ATPase
Other DBs
NCBI-ProteinID: AMQ56040
UniProt: A0A142ELN5
LinkDB
Position
1445384..1446724
AA seq 446 aa
MFDNLSLKLDRAFKTLKGTGKITEINVASTVKEIRRALIDADVNYKVAKEVTDKIKDEAM
GRDVLISVSPGQLLVKITQEELTKLMGGSKVDIKLSGDPAVILISGLQGSGKTTFTGKLG
NLLKKQGRQVLLVACDIYRPAAIDQLKVLGEQIGVEVYAEPENKNALQIANNAIAYAKKT
GKKTVVVDTAGRLAVDEQMMKEIEELKKALNPSETLFVVDSMTGQDAVNTARTFDERLNF
DGVVLTKLDGDTRGGAAISIRHVVNKPIKFISTGEKMENLDVFHPDRMAQRILGMGDVIS
LVERAQQAFDEDEAKRINAKIRQNNFNFDDFLSQLEQVKKMGNIKDLIGMIPGMGKAMKG
LDIDENSFKPIEAIIRSMTPHERQNPDVINGSRRKRIADGAGRNITEVNNLMKQFDDMRK
LMKKMNQMGGAKQALGRMVPPGMGRR
NT seq 1341 nt   +upstreamnt  +downstreamnt
atgtttgataatttaagtttgaagctggaccgggctttcaaaaccctgaaaggaaccgga
aaaatcaccgaaatcaacgtcgcatctaccgtaaaggagatcagaagagccctgatcgat
gccgacgtcaactataaagtagccaaagaagtcaccgataagatcaaggacgaggctatg
ggccgggatgtgttgatctccgtttctccagggcaacttttggttaaaatcactcaggaa
gaactgaccaagctgatgggcggttccaaagtggatatcaaactcagtggtgatcctgca
gtgatcctaatctcaggtttgcagggttcgggtaagacgacatttactggtaagctcgga
aatttgcttaaaaagcaaggccgtcaggtgttattggtggcttgtgatatttatcgtcct
gctgcgattgatcaattgaaagttttgggtgagcagattggtgtggaggtttatgctgag
cctgaaaataaaaatgcccttcaaatcgccaacaatgcgattgcctatgccaagaaaacc
ggtaagaagacggtcgtagtcgatacagcaggtcgtttggcagtggacgagcagatgatg
aaggagattgaagagctgaaaaaagcactcaatccttctgaaacactttttgtggtggac
tcgatgacgggtcaggatgcagtaaataccgcccgtacttttgacgagcgtctcaatttc
gacggggttgttttgaccaagttggacggtgatacacgtggtggtgcggctatttccatt
cgccacgtagttaacaagccgatcaaattcatttctacaggcgaaaagatggagaacctt
gatgtcttccatccagatcgtatggcgcaacgaatcctaggtatgggtgacgtgatttcc
ctcgtggagcgtgcacagcaagcctttgatgaggacgaggccaagcgaatcaatgccaaa
atccgtcagaacaacttcaactttgatgacttcctttctcagctcgagcaggtgaaaaag
atgggtaatatcaaagacctgatcgggatgatcccaggaatgggaaaggcgatgaaggga
ttggatatcgacgaaaacagctttaagccaatcgaagcgatcatccgaagtatgacccct
cacgagcgtcagaatcctgatgtgatcaatggcagccgtagaaagcggattgctgatggt
gccggcagaaatatcacggaagtcaataatttgatgaagcagtttgacgatatgcgcaag
ctgatgaagaaaatgaatcaaatggggggcgctaagcaggccttaggacgaatggtgcct
ccaggaatgggaagaaggtaa

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