Algoriphagus sanaruensis: AO498_08195
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Entry
AO498_08195 CDS
T04334
Name
(GenBank) DNA-binding protein
KO
K19036
ATP-dependent RNA/DNA helicase IGHMBP2 [EC:
5.6.2.5
5.6.2.3
]
Organism
alm
Algoriphagus sanaruensis
Brite
KEGG Orthology (KO) [BR:
alm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
alm03009
]
AO498_08195
03012 Translation factors [BR:
alm03012
]
AO498_08195
Enzymes [BR:
alm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
AO498_08195
5.6.2.5 RNA 5'-3' helicase
AO498_08195
Ribosome biogenesis [BR:
alm03009
]
Eukaryotic type
Other ribosome biogenesis factors
AO498_08195
Translation factors [BR:
alm03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
AO498_08195
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_11
AAA_12
AAA_30
Helicase_RecD
AAA_19
Viral_helicase1
ResIII
AAA_22
UvrD_C_2
DEAD
T2SSE
SMUBP-2_HCS1_1B
AAA_16
PhoH
AAA
SLFN-g3_helicase
RuvB_N
UvrD-helicase
nSTAND3
IstB_IS21
Flavi_DEAD
NPHP3_N
ParA
DAP3
AAA_28
Motif
Other DBs
NCBI-ProteinID:
AMQ56392
UniProt:
A0A142EMN7
LinkDB
All DBs
Position
1838478..1840403
Genome browser
AA seq
641 aa
AA seq
DB search
MPNYLEELKLGLKLLKLEWQEDLAQYKKKFLNTTVADKKKEGITWHPILLKKTKIGMGER
LIVEVERTDTQYPSAFSSGKSVSFFSTQEGFHGSEFRVNGVVNQAKRDSLIVTLQADEVP
DWMDSGRLGVDLLFDEASYREMEAALKKVISSEVPRLTELREIAYGEKSPKFKDINQVQL
EGLNFSQNLACQKIESAQDFAIVHGPPGTGKTTTLIAAIQQAVALNQRILVTAPSNAAVD
LLVEKLVDRGIQTLRLGHPARVEEKILNQTLDAKIAFHDSYRDLKKLRKETESYLRLAKQ
YKRNFGPEERAQRKLMYQEVSRIREAAEHLEDYIRTDIYQRTQVFASTLVGSSSHHLKGI
VFDVVFIDEAAQGLEAATWIPILKAKKVVFAGDHCQLPPTIKSYDAAKQGLSTTLFEKII
RRQPQTAQMLQVQYRMPEAIMGFSNQHFYDGKLEAAPNTQFHAFSPEEAVLEWIDTAGSG
YTDQQEAESLSTFNPEEARFACTYLNDTVKRIGFGLFKEKGWSIGLIAPYSAQVRRLRHL
IFETYEFPNLKAFADLITIDTVDGFQGQERDLMLISLTRSNEKGEIGFLADERRMNVAIT
RAKRKLILIGDSSTLAQNPFFDELIRYVETSGSYRSVWEFL
NT seq
1926 nt
NT seq
+upstream
nt +downstream
nt
atgccgaattacctcgaagaattaaagttgggcttaaaacttctcaaattggagtggcaa
gaagacctagctcagtacaaaaagaaattcttaaatacgaccgttgctgacaagaagaag
gagggcattacttggcatcctattttgctcaagaagaccaaaattgggatgggggagcga
ttgattgtggaggtggagcggaccgatactcagtacccttcagcattttcttcaggtaaa
tccgtttcttttttttctactcaagaaggattccatggttcggaatttcgagtaaatgga
gtggtcaatcaggcgaaaagagattccctaatcgtcacccttcaggcagatgaagttccg
gattggatggactcaggcaggttgggagtagacttactcttcgacgaggcaagttatcga
gaaatggaagcggctcttaaaaaggtgatttcttccgaggttccccggctaaccgagctt
cgagaaatagcttatggagaaaaaagtccaaaatttaaagatatcaaccaggttcaactg
gaggggttgaatttttcccaaaatctagcctgtcaaaaaatagagtccgcccaagatttt
gcgattgtacatggacctcctggaactggaaaaacgactactttgattgcggccattcag
caggctgtcgctctaaatcagcgaatattggtgacagcacctagtaatgcagctgtggat
ttacttgtagaaaagttagtcgatcgaggaattcaaacccttcgattggggcaccctgct
cgggtggaggagaaaattctcaatcaaaccttggatgccaaaattgcttttcacgacagc
tatcgagatctaaaaaaactcagaaaggaaaccgaatcttaccttcgcttggccaagcaa
tacaagcgtaactttggtccagaggagcgtgcacagcggaaactgatgtatcaggaagtg
tcccgaattcgtgaggccgctgagcatttggaggattatattcgaacagatatttatcag
cgaactcaggtttttgccagcaccttggttggatcctcctcccatcatttgaaagggata
gtattcgatgtcgtttttatcgatgaagctgcccaaggattggaggcagctacttggatt
cctatcttgaaggccaaaaaagtggtgtttgctggggatcattgccagttgcctccgact
atcaaatcctatgatgcggcaaaacagggcttatctactacactttttgaaaaaataatt
cggcgacagcctcaaacagcgcaaatgctacaggttcaataccgaatgccagaggccatc
atgggcttttccaatcagcacttttacgatgggaaattggaagctgctccaaatacgcag
tttcatgcattcagtccggaagaagccgtattagaatggatcgatacagcagggtcagga
tataccgatcagcaggaggccgaaagtttgagcacatttaatcctgaggaagctcgattt
gcatgcacctatctcaatgatactgttaaacggattgggtttggtttgttcaaggaaaaa
ggctggtctattggcttaattgctccgtattctgcccaggtcagaaggctacgtcatttg
atttttgaaacctatgaattccccaatctgaaagcatttgcggatttgataaccatcgat
actgtggatggatttcaaggacaagagcgagacttgatgttgatctccttgacgagatcc
aatgagaagggagaaatcgggtttttggccgatgagcgaagaatgaatgtggcaatcacc
cgtgccaaacgtaagttgatcctaatcggagatagcagtacactggctcagaatcctttt
tttgatgaattgattcgatatgtggagacctcgggatcctatcgaagtgtctgggagttt
ttgtag
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