Algoriphagus sanaruensis: AO498_12915
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Entry
AO498_12915 CDS
T04334
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
alm
Algoriphagus sanaruensis
Brite
KEGG Orthology (KO) [BR:
alm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
alm03032
]
AO498_12915
03400 DNA repair and recombination proteins [BR:
alm03400
]
AO498_12915
Enzymes [BR:
alm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
AO498_12915
DNA replication proteins [BR:
alm03032
]
Prokaryotic type
DNA Topoisomerases
AO498_12915
DNA repair and recombination proteins [BR:
alm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
AO498_12915
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
O-FucT
SBP_bac_3
Motif
Other DBs
NCBI-ProteinID:
AMQ57341
UniProt:
A0A142EQD6
LinkDB
All DBs
Position
2937526..2939853
Genome browser
AA seq
775 aa
AA seq
DB search
MSKNLVIVESPAKAKTIEGYLGKDYKVVSSYGHVRDLPKGDKAIDIKNRFKPTYEVTPDK
KEVIKNLKSLAKDAETVYLASDDDREGEAISWHLKEVLKLNDENTKRIVFREITKNAITR
AIENPRGIDYDLVNAQQARRILDRLVGFELSPILWKKIKTGLSAGRVQSVAVRLIVERER
EIEAHKSKSSYRITALFEADGKSFQAELPKKFETKAEAEEFLKSCLQATFSVGNLEKKPV
KKTPAPPFTTSTLQQEASRKLYFSVAQTMSVAQKLYEAGKITYMRTDSTNLSQDALAAAK
NAIENSYGAQYHKSRQFSTKNESAQEAHEAIRPTDFSVSQISADRNEQRLYELIWKRAIA
SQMADAELERTIVTIQISNNTQHLTATGEIIRFEGFLKVYLEDTDDEPEEEEDGSKSLLP
PLQLNQSLHLKEMKGRETFSRPAPRYTEASLVKKLEELGIGRPSTYAPTISTIQKREYVV
KEAREGTQRSYIEMVINGGQFKETTKTETTGAEKNKLFPTNMAMVVNDFLVEHFPNVIDF
NFTAKVEKEFDEIAAGGQDWQDMIDGFYGKFHHSVEETEQVSRQDVNTSRLIGQHPESGR
NVYARLGRFGPLVQIGENEDEDKQFASLKKGQFIENVSMEDALELFKLPREVGYFEDKKM
TAAIGRFGPYIRHDNAFYSLQKGQDPLSITEEEGIQLILAKREADANKHIKSFEENAEIQ
ILNGRWGPYIKFGKNNFKIPKGKVAEELTYAETIEIIESQPDAGKKKGKFPAKKK
NT seq
2328 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaaaaatctagtcatcgtcgaatcacccgccaaggcaaagaccatcgaagggtat
ttgggaaaagattacaaagtagtatccagctatggacacgtgagggatttacccaaaggt
gataaagcgatcgacattaaaaaccgattcaaaccgacttacgaagtcaccccagataaa
aaagaagtcatcaaaaacttgaaatctctggctaaagatgccgagacagtttatctggca
agtgacgatgaccgagaaggagaagctatttcatggcatttgaaagaggttttaaagctc
aatgatgaaaataccaagcgaattgtatttcgagaaatcaccaaaaatgcaattacaaga
gccattgaaaacccacgaggaattgactatgacttggtaaatgctcaacaagcccgaaga
attttagacaggttggtgggctttgagctttctcctattctctggaaaaaaatcaaaacc
ggactttcagcaggcagagttcaatctgtagccgttcgcctaatcgtggagagagaacga
gaaattgaagctcacaaatcgaaatcttcatatagaattacggccttatttgaagcagat
ggtaaatcgtttcaggccgaactaccaaagaaattcgaaaccaaagcagaagcagaagaa
ttcttaaaatcctgtcttcaggctactttttcggttgggaatttggagaaaaagccggtt
aaaaaaacaccagcacctcctttcacaacctcaaccttacaacaagaggcttcgcgtaaa
ctatacttttccgtagcccagaccatgtcggtagctcaaaagctttacgaagctgggaaa
atcacctacatgcgtacggacagcaccaatttatctcaggatgcgttggccgctgctaaa
aatgccattgaaaactcttacggtgctcaataccataaatcaagacagttttcaacgaag
aacgaaagtgctcaggaagctcacgaggcgatccgacctacggatttttcggttagtcaa
atcagcgctgatcgaaatgagcaacgcttgtatgaactgatttggaaacgggcaatcgct
tcccaaatggcagatgccgaactcgaacgcaccattgttaccattcagatttccaataat
acccagcatctcactgcaaccggagaaatcatccgatttgaaggatttttgaaagtctat
ttggaagacaccgacgatgagccagaagaggaggaagatggaagtaaatcattattacct
ccacttcaactgaaccaatcgctccacctcaaagaaatgaaaggtagagaaacattcagc
cgtcctgcgccaagatataccgaagcttcattggtcaaaaaactagaagaattgggaatt
ggtcgtccgtccacctatgcacctactatttccacgattcagaaacgggaatatgtcgta
aaagaagctcgtgaaggcacccaaagatcttacatcgagatggtgatcaatggaggtcaa
ttcaaagaaaccaccaagaccgaaacgactggtgcagagaaaaacaagcttttccctacc
aacatggccatggtggtaaatgacttcttagtggagcattttcccaatgtcatcgacttt
aatttcactgccaaagtagaaaaggagtttgacgagattgcagctggtggacaggactgg
caggatatgattgatggattctatggaaaattccatcatagtgtcgaggaaacggaacag
gtttcccgtcaagacgtcaataccagccggctaattggtcaacatcctgaatctggtcga
aacgtatatgcacgactgggaagatttggcccgctagttcaaatcggtgaaaatgaggat
gaagacaagcaattcgccagtttgaaaaaaggccaattcatcgaaaatgtctccatggaa
gatgctttggaattattcaaacttccacgagaggttggatacttcgaagacaaaaaaatg
actgctgcaattggtcgatttggtccttacatccgacatgacaatgctttctattcctta
caaaaaggccaagacccattatccattaccgaagaagaaggcattcagctgattctagcc
aaacgagaagccgatgccaataaacacatcaaatcatttgaggaaaacgctgaaattcag
attctaaatggtcgatggggcccttatatcaagtttggaaaaaacaactttaaaattcca
aaaggaaaagttgccgaggaactcacctatgccgaaactattgagattatagaatctcaa
ccggatgccggaaagaaaaaaggcaagtttccagcaaagaagaaataa
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