Algoriphagus sanaruensis: AO498_12970
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Entry
AO498_12970 CDS
T04334
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
alm
Algoriphagus sanaruensis
Pathway
alm03030
DNA replication
alm03430
Mismatch repair
alm03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
alm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AO498_12970
03430 Mismatch repair
AO498_12970
03440 Homologous recombination
AO498_12970
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
alm03032
]
AO498_12970
03400 DNA repair and recombination proteins [BR:
alm03400
]
AO498_12970
Enzymes [BR:
alm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
AO498_12970
DNA replication proteins [BR:
alm03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
AO498_12970
DNA repair and recombination proteins [BR:
alm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
AO498_12970
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
GIY-YIG
Rv2179c-like
GIY_YIG_2
DUF7508
DEDDh_C
DNApol_Exo
Motif
Other DBs
NCBI-ProteinID:
AMQ57353
UniProt:
A0A142EQE8
LinkDB
All DBs
Position
complement(2951125..2952513)
Genome browser
AA seq
462 aa
AA seq
DB search
MQFAIVDIETTGGAPSGGGITEIAVVLHDGEKITGEFQTLLNPQQYIPGFITGLTGIDQQ
MVADAPVFEEIADELWELLKDRVFVAHNVNFDFSFIREAFSKNGKTWNPPRLCTVRMARK
AIPGMGSYSLGRLCESLRIPILARHRAMGDAKATAILFDKIIREKSDIVYSSLKKNSGES
YLPPNFPLSKFRQIPEACGVYYMLNAKGKVIYVGKANNIKERFKGHFSGKVLPQLKQKLK
EEVTDLKWQITGSEFMALLIEMLEIKRIWPIYNSALKSPKSLWGIFHYQDGSGFSRFQIS
KTTKNLRPLETFFSQEEAKQYLQSATETYQLCGKLNGLHKVSCNHLNGATCLGACFSNES
PKSYNQRAEEWVQLLSTSKKDILIKLEGRSKDEVAACVFSGGVLTRYGFVASTEVEIEQL
EKVNPVPETFYILRQYLHQFDLSQITVLERKIEESPWILNFG
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atgcaattcgcaatcgtggatattgaaactacaggtggagcaccttcaggaggagggatc
actgagattgcagttgtgcttcacgatggggagaaaatcacaggtgagtttcaaacttta
ctcaatccccagcaatatatcccgggatttatcaccggattaaccggaatagatcagcag
atggtcgccgatgcaccggtatttgaagaaatagcggacgagttatgggaactcttgaaa
gatcgagtgtttgtggcccataatgtcaattttgatttcagttttattcgggaggcgttt
tccaaaaatggaaaaacatggaatccaccacgattatgtaccgtgagaatggctcgaaaa
gctatccctggaatgggttcgtatagtttggggagattatgcgaaagtctccgaattccc
attttggcacgtcaccgagctatgggagatgcaaaagctaccgccattctttttgataag
atcattcgggaaaaatccgatatcgtctattcctctttgaaaaaaaacagtggggaatcc
tatcttccgcccaatttcccattatcaaaattccgtcaaattccggaggcctgcggggtt
tattacatgctcaatgccaaaggaaaagtgatctatgtgggaaaagccaataatatcaag
gagcgatttaaaggtcatttttcgggaaaggtgttgcctcaactcaagcaaaagcttaag
gaagaagtaaccgaccttaaatggcaaattactggttccgagtttatggctttgctcatc
gaaatgcttgaaatcaagcgaatttggccgatttataattcagcgctcaaaagccctaag
tcgctttggggtatttttcattatcaagatggatcaggcttttcaagatttcaaatctcc
aaaaccaccaaaaatcttcgccctttggagactttttttagtcaagaagaagccaagcaa
tatctgcagtctgccactgaaacctatcaactttgtgggaagctcaatggcttgcataaa
gtatcttgtaaccatttaaatggggcaacttgccttggggcttgtttctcaaatgaatca
ccgaaaagctacaatcagcgagcagaagaatgggtccaacttctaagtacttctaaaaaa
gatattttaatcaaactcgagggaagaagtaaagatgaagttgccgcctgcgttttttca
ggcggtgttttgacccgttatggtttcgtcgcttcaactgaagtggaaatcgagcagttg
gaaaaagtgaatccagtccctgagacattttacatcctcagacaatacctccatcaattt
gacctcagtcaaatcactgttttagaacgaaaaatagaggaatcgccttggatattaaac
tttggttag
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