Algoriphagus sanaruensis: AO498_15995 Help Entry AO498_15995       CDS       T04334                                  Name (GenBank) RNA polymerase sigma-54 factor   KO K03092   RNA polymerase sigma-54 factor Organism alm  Algoriphagus sanaruensis Pathway alm02020   Two-component system alm02040   Flagellar assembly Brite KEGG Orthology (KO) [BR:alm00001]  09130 Environmental Information Processing   09132 Signal transduction    02020 Two-component system     AO498_15995  09140 Cellular Processes   09142 Cell motility    02040 Flagellar assembly     AO498_15995  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:alm03021]     AO498_15995 Transcription machinery [BR:alm03021]  Prokaryotic type   Bacterial type    RNA polymerase     Sigma factors      AO498_15995 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Sigma54_CBD Sigma54_DBD Sigma54_AID HTH_12 MarR SF3b1 LacI HTH_IclR Motif Other DBs NCBI-ProteinID:  AMQ57956 UniProt:  A0A142ES51 LinkDB All DBs Position complement(3682308..3683768) Genome browser AA seq 486 aa AA seqDB search MQKLNLTQSLSQKLSPQQIQFIKLLQVPTAELDARIEEELEINPALEEGREEESDKAQEE DDFEDSYEDDLGRDDHEINLDDYLDDEYSGYKMQGDGNYNADEEDREIPISSQSSLHEQL ISQLNFLKLDDRQKIIGQQLIGSIENDGYIRRDLEAIINDLAFSQNIETDIDEMEEILRK IQTFDPAGIAARNLQECLIIQLERKEHPDDPMVLHALAIVQDCFEEFTKKHYPKIQKRLD LSEEEIKDAVNLITRLNPKPGGISDGLVRTQYIIPDFILTNNSGKLEVSLNSKNAPELRI SRSYADMFDAYDKSDKKDKKLKETVTFVKQKLDAAKWFIDAIKQRQNTLLRTMEAILNYQ KEFFIDGDETNLRPMILKDIAEKIDMDISTVSRVANSKSIQTEFGVYPLKYFFSEGIATD SGEDVSNREVKSVLQGMVDAEDKKKPLSDDKLVKMLNKKGYNIARRTVAKYREQLQIPVA RLRKEL NT seq 1461 nt NT seq  +upstreamnt  +downstreamnt atgcaaaagcttaatcttacacaatcgctttcacagaagctttctccgcagcaaattcag tttatcaaattgttgcaggtgcctacagcggaactggatgcacgtattgaagaggaattg gaaattaatcccgcgctggaggaagggcgcgaggaagaatctgataaagctcaagaagag gatgattttgaggattcgtatgaggatgatttggggcgggatgatcatgaaatcaacttg gatgactatctcgatgatgagtatagtgggtataaaatgcaaggagatgggaattacaac gccgacgaggaagatcgggaaattccaatatcctcccagtcgagcttgcatgagcagctg atctcccagcttaactttttgaaactggatgatcgtcagaaaatcattggtcagcaattg atcggaagtattgaaaatgatggctatatccgccgggatctcgaggcaatcattaatgat ttggctttttctcaaaatattgaaacggatattgatgagatggaggagatccttaggaag attcaaacttttgatcctgcaggaatcgccgcaagaaatcttcaagaatgcctgattatt caattggagcggaaagagcacccagatgatccgatggttttacatgccttagccattgtt caggattgttttgaagaattcaccaaaaagcattaccctaaaattcaaaagagactggat ctttctgaggaggagatcaaagatgcggtcaatctaattacgcgattaaatcctaagcca ggaggtatttctgatggcttggtccgtacgcaatacatcattcctgattttattttgacc aacaatagcgggaagctagaggtcagtctaaattctaaaaatgctcctgaacttcggatt tctagatcctatgcggatatgtttgacgcgtatgataagagtgacaagaaagataaaaag cttaaagaaactgtcacttttgtcaagcaaaaacttgatgccgccaaatggtttatcgat gcaatcaaacagcgccaaaatacgcttttgagaaccatggaggcgattcttaactatcaa aaggaattttttatcgatggagatgagactaatcttcgaccgatgattctaaaggatatt gctgagaaaattgatatggatatttcaacggtttctcgtgtggcaaatagtaaatccatt cagacggagtttggagtttatcctttgaaatatttcttttcagaggggattgctacagat agtggggaagatgtcagcaatcgagaagtcaaatcagtattgcagggaatggtggatgcc gaggataaaaagaaaccgctatctgatgataagctggtgaaaatgctgaataaaaaaggg tacaatattgctcgccgtacagttgccaaataccgtgagcaactccagattcctgtagca agacttagaaaggaattgtag

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