Alcanivorax sp. NBRC 101098: AS19_03390
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Entry
AS19_03390 CDS
T03879
Name
(GenBank) transcription elongation factor
KO
K02600
transcription termination/antitermination protein NusA
Organism
aln
Alcanivorax sp. NBRC 101098
Brite
KEGG Orthology (KO) [BR:
aln00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aln03021
]
AS19_03390
03009 Ribosome biogenesis [BR:
aln03009
]
AS19_03390
Transcription machinery [BR:
aln03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
AS19_03390
Ribosome biogenesis [BR:
aln03009
]
Prokaryotic type
rRNA transcription factors
AS19_03390
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NusA_N
KH_5
HHH_5
S1
RNA_pol_A_CTD
KH_NusA_C
vWA_Ro60
Motif
Other DBs
NCBI-ProteinID:
BAP13190
UniProt:
A0AAD1B0K2
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Position
359397..360905
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AA seq
502 aa
AA seq
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MNKEILLVAETVSNEKGVSRDVIFEAIELALAAATKKRFKQEDVEIRVDIDRESGNARSF
RVWHVVPDEELFEFGKQLTLDEAHEQDTSLQIGDIWEEEVESEAFGRIAAQTAKQVIVQK
VREAERRQIVEEYRDRIGDLVSGTVKKASRDSIVLDLGGNAEALITREHMIPREAVRQND
RVRAYLLGVNEENRGPQLFASRACPDMLVELFKIEVPEIGEELIEIKGAARDPGSRAKIA
VKTNDQRIDPVGACVGMRGARVQAVSNELAGERIDIVLWDDNPAQLVINAMQPAEVASIV
MDEESHSMDIAVEDESALAQAIGRSGQNIRLASELTGWELNVMTIDDAESKQEQEAEQAL
QTFINELEVDEDVAGVLVDEGFSTLEEVAYVPEEEMLAIDGFDEEIVELLRQRAKDALLT
KALVSEEKFDQAEPAEDLLNMEGMDRELAVELASRDIVTMEDLAEQAVDDLLEIEGLSEE
RAAELIMTARAPWFEGEDEAGA
NT seq
1509 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaagagatcctgctggtagcggaaaccgtatcaaacgagaagggtgtaagccgc
gacgtaatttttgaggccattgaactggctctcgcggcagctaccaagaagcggttcaag
caagaagacgtggaaattcgtgtggatattgaccgtgagtccggtaatgcccgcagcttt
cgtgtatggcacgtagtgcctgatgaagaactctttgaattcggtaagcaactgacattg
gatgaagcccacgagcaggatacgtctctgcagatcggggacatctgggaagaggaagtt
gaatccgaagcctttggtcgtattgctgcgcaaactgctaagcaggtcattgtacagaaa
gtacgtgaagcggagcgtcgtcaaattgttgaggaatatcgtgatcgcattggcgacttg
gtcagtggcacggtaaagaaagccagccgtgattctatcgtgctggacttgggcggcaac
gccgaagcactgattactcgtgaacacatgattccccgtgaggccgttcgccaaaacgac
cgtgtccgtgcctatctgctgggcgtaaatgaagaaaatcgtggtccgcagctgtttgcc
agccgtgcttgcccggacatgttggtggagctgtttaaaattgaagtgccagagatcggt
gaagagctgatcgaaattaaaggcgctgctcgtgatccaggctcccgagccaaaattgcc
gtaaagaccaatgatcagcgtattgatccggttggcgcttgcgtaggcatgcgtggtgcg
cgggttcaggccgtttccaatgagctggctggtgagcgtatcgatattgtcctgtgggac
gacaaccccgcacagctagtgattaatgcaatgcagccggcggaagtggcttccattgtt
atggatgaagaaagccattccatggatattgccgtggaagatgagtctgcattggcccag
gctatcggccgtagtgggcagaacattcgcctagcgtctgagttaaccggctgggaactc
aacgtcatgaccattgatgacgctgagagcaaacaggaacaagaagccgagcaagccctg
caaacattcatcaacgagttagaagtagatgaagatgtggcgggtgtgctagtggatgaa
ggtttctctacccttgaagaagtggcctatgtgccagaggaagagatgctggctatcgac
ggctttgatgaggagatcgtagagcttttacgccagcgtgccaaagatgcgctgttgact
aaagccctggtatctgaagagaagtttgatcaagccgagcccgcggaagaccttctcaac
atggaaggtatggatcgcgagttggctgttgaattggcttcccgtgacattgttacgatg
gaagacctcgccgaacaggcagtggatgacctgctggaaattgaaggcctgagcgaagag
cgtgcagccgagttgattatgactgcgcgcgcgccttggtttgaaggtgaagacgaagcc
ggggcgtaa
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