Alcanivorax sp. NBRC 101098: AS19_07780
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Entry
AS19_07780 CDS
T03879
Name
(GenBank) holliday junction DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
aln
Alcanivorax sp. NBRC 101098
Pathway
aln03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
aln00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
AS19_07780
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aln03400
]
AS19_07780
Enzymes [BR:
aln01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AS19_07780
DNA repair and recombination proteins [BR:
aln03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
AS19_07780
RecFOR pathway proteins
AS19_07780
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
AAA_3
AAA_22
Mg_chelatase
nSTAND3
AAA_17
AAA_14
Rad17
AAA_16
RNA_helicase
AAA_18
TIP49
ABC_tran
NTPase_1
Sigma54_activ_2
AAA_24
AAA_33
AAA_28
NACHT
TsaE
NB-ARC
Motif
Other DBs
NCBI-ProteinID:
BAP13629
UniProt:
A0AAD1EYC1
LinkDB
All DBs
Position
846815..847843
Genome browser
AA seq
342 aa
AA seq
DB search
MDNERVITAVAVGSQEEQQDRAIRPASLADYHGQPKVSERMEIFIDAARGRNEALDHTLI
FGPPGLGKTTLAHIIAREMGCDLKSTSGPVLEKAGDLAAILTNLEEGDVLFVDEIHRLSP
VVEEILYPAMEDYQLDIMIGEGPAARSIKLDLPPFTLVGATTRAGLLTAPLRDRFGIVQR
LEFYSVDDLSGIVSRACDILAIPIEAAGAMEVARRARGTPRIANRLLRRVRDYAEVKGDG
RITEEIAQRALDMLEVDSCGLDGTDRRLLDMIMHKFDGGPVGLESLAAALNEDSGTLEEV
VEPYLIQQGFIQRTPRGRAVTNHAWRHFGLQRPRQDGDLFND
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
atggataacgaacgagtcattaccgcggttgccgttggtagccaagaagaacagcaagac
agggcgattcgcccggccagcttggcggattatcatgggcagccgaaagtcagcgagcgc
atggaaatctttattgatgccgcccgcggacgcaatgaggcccttgatcatactttaatt
ttcggcccgcccggtctcggcaagacgacgcttgcccatatcattgcccgagaaatgggc
tgcgatctcaagtccacctctggtccggtgctggaaaaggcaggcgatttggcggccatc
ctgaccaacctggaagagggcgatgtgctttttgtggatgaaattcaccgcctgtctccg
gtggtagaggaaatcctttatccggctatggaagattaccagttggatatcatgatcggt
gaagggccggccgcccgttccatcaaactggatcttccgccgtttactcttgtcggtgcg
accacccgagccggtttgcttaccgctccgttgcgtgatcgttttggtattgtgcagcgc
ctcgaattctattctgtagatgacttgtccggcattgttagccgcgcctgcgatattctt
gctattcctatcgaagcggccggtgccatggaagtggcgcgccgcgcacgtggtaccccg
cgtattgccaatcgcctgctgcgccgcgtgcgcgattacgccgaagtgaagggcgatggg
cggattactgaagagatcgcccagcgagccttggacatgctggaggtggacagttgtggt
ctggacggcactgaccggcgcctgctggatatgatcatgcacaaatttgatggtgggccg
gtgggactggaatccttggcagcagcactcaatgaagactccggaaccttggaagaggtg
gtggagccttacctgatacagcaaggctttattcaacgcaccccgcgtgggcgggcagtg
actaaccatgcttggcgtcattttggtttgcagcgcccgcgtcaagacggtgatttgttt
aatgattga
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