Alcanivorax sp. NBRC 101098: AS19_08130
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Entry
AS19_08130 CDS
T03879
Name
(GenBank) DNA photolyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
aln
Alcanivorax sp. NBRC 101098
Brite
KEGG Orthology (KO) [BR:
aln00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aln03400
]
AS19_08130
Enzymes [BR:
aln01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
AS19_08130
DNA repair and recombination proteins [BR:
aln03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
AS19_08130
Prokaryotic type
AS19_08130
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
YcgL
Linocin_M18
Motif
Other DBs
NCBI-ProteinID:
BAP13664
UniProt:
A0AAD1B143
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Position
878371..879825
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AA seq
484 aa
AA seq
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MNLVWYRNDLRVAAHSPLHAALTESSISAGETRPQALAVYCLCQGQWDRHQVAPLRRWYV
LESLRELGESLANRGIDLHVLDVDTFEKVPEALAEFAQSQGVTHLYCNREYPLNEKQRDT
LVAERLREQGIILRGFDDGVLVPPAALRTGKGTPYTVFGAYKKRWDVWMADHHPAMTPVP
SQCRAEGTFMGAKVVAKALEMLDVPEALTQQWAPGEEAAWQQLDQFMERSLADYRRNRDF
PDLSGTSGLSVALSAGTLSVASCFRAATQAMADAGSRDGAACWIGELAWRDFYRQIMAQF
PRVSRGQGFRPETDLLEWKNDDELFAAWCEGRTGYPLVDAAMRQLVATGWMHNRLRMVTA
MFLSKHLWLDWRRGEAFFMTHLIDGDFAANNGGWQWSASSGTDAVPYFRVFNPVRQGQRF
DSEGRFIAHWVPQLRDLDSKQIHEPWKQPLLARDYPPPVVPHAGVRERVTVAFKAAKSRF
DKTS
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atgaatctggtctggtaccgcaacgacctgcgtgtcgcggcacactcgcctctgcacgct
gcgttgacagagtcatcgataagcgcgggtgagacgaggccacaggcgctggcggtgtat
tgtctgtgtcaggggcaatgggatcgtcatcaggtggcgccgttgcgccgctggtatgtg
ttggaaagcttgcgtgagctgggcgagtccctggctaaccgcggcattgatctgcatgtg
ctggatgtggacaccttcgagaaggtgccggaggcgttagcagaatttgcccagagccaa
ggtgtgactcacctgtattgcaatcgtgagtatccgctcaatgaaaagcagcgagacaca
ctggtggctgaacgcctgcgtgagcaagggattatcctgcgcggtttcgacgatggcgtg
ttagttccacccgcggcactgcgcaccggtaaaggaacaccgtatacggtgtttggggct
tataagaaacgttgggatgtatggatggccgatcatcacccggcgatgacaccggtgcca
tcacaatgcagggctgaaggtacgtttatgggggctaaggttgtggcgaaggcccttgaa
atgctggacgtgcctgaggcgctaacgcagcaatgggcgcctggagaagaggccgcctgg
caacaacttgatcaatttatggagcggtcgctggccgactatcgccgcaaccgtgatttt
cctgatttgtctggcaccagcggcttatcggtggcgctatcggcgggaaccctgtcggtg
gccagttgtttccgggccgcaacccaggccatggcggatgcgggtagccgtgatggtgct
gcctgctggatcggcgagttggcctggcgggatttttaccgccagatcatggcgcagttt
cctcgcgttagccgcggacaaggcttccggccggaaacggatttgctggaatggaaaaat
gatgacgagctattcgccgcttggtgtgaagggcgtacggggtacccgctggtggatgca
gccatgcggcagctggttgccaccggctggatgcataaccggctacgcatggtgacagcc
atgtttctcagtaagcatctttggctggattggcgccgcggtgaagcgttctttatgaca
catttgatcgatggggactttgccgccaataacggtggctggcagtggagtgcctcatct
ggcaccgatgcggtgccttattttcgggtgtttaatccggttcgtcaggggcaacgtttt
gatagcgaaggccgttttattgctcattgggtgccgcaattgcgcgacttggatagcaag
caaatccatgagccctggaagcagccgctactggcccgggattatccaccaccggtggtg
ccccatgcgggagtgcgtgagcgggtgacggtagcgttcaaggcggctaaaagccggttt
gataaaacctcttag
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