Alcanivorax sp. NBRC 101098: AS19_11210
Help
Entry
AS19_11210 CDS
T03879
Name
(GenBank) LPS ABC transporter permease protein
KO
K11085
ATP-binding cassette, subfamily B, bacterial MsbA [EC:
7.5.2.6
]
Organism
aln
Alcanivorax sp. NBRC 101098
Pathway
aln02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
aln00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
AS19_11210
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
aln02000
]
AS19_11210
Enzymes [BR:
aln01000
]
7. Translocases
7.5 Catalysing the translocation of carbohydrates and their derivatives
7.5.2 Linked to the hydrolysis of a nucleoside triphosphate
7.5.2.6 ABC-type lipid A-core oligosaccharide transporter
AS19_11210
Transporters [BR:
aln02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
AS19_11210
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_22
AAA_16
RsgA_GTPase
AAA_29
Zeta_toxin
AAA_25
AAA_24
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
BAP13972
UniProt:
A0AAD1EY96
LinkDB
All DBs
Position
1227055..1228803
Genome browser
AA seq
582 aa
AA seq
DB search
MSQPIPPEDVWPTYKRLLSYVRPYWFMLVISVIGYALYAGAQAGAAQLAGYLGDTIVNPT
DARVLIVSIAPLVLVLFQGLGQFMGSYSMNWVAQQIVYVLRNDVFEHVLKLPQSEYHRNA
SGRIMSKIIFDAQQVTSAGTDAIIVIIREGLTVIGLFSFLLWQNWKLTLILVTVVPLIAL
VMNITSKRFRKISRRIQSSMANITHFLGEAIEGSGEVKIFGGQAQEADRFHNVSRSFAKQ
NVKLNASKIASTVIVQLFVAVGIGFITYLYIHLMGEDLTVGGFLSYITAAGMIQKPLKQL
TDVNVKVQRGVTGAASLFELLDTEQETDTGTYTVATKVDGNIDFEGVSFGYDPASPVVRQ
LNFAIKAGETVALVGRSGAGKSTISAMLPRFFDPDQGRILLDGIPLQEYQLSELRNQIAM
VSQRVVLFNDSVRNNIAYGELRSSDDASIIKAAKDAHAWSFIEQLEHGLDTLLGQDGVQL
SGGQRQRIAIARALLKDAPVLILDEATSALDSESEHHIQQALEQVMQGRTTLVIAHRLST
IEKADRIMVLDQGQLIEQGSHQQLLEKNGLYTQMYRMNFSEE
NT seq
1749 nt
NT seq
+upstream
nt +downstream
nt
atgagtcaacctattccccctgaggacgtgtggccaacctacaagcggctactgagttat
gttcgtccttactggtttatgctggttatcagcgttattggctatgcgttatatgccggc
gcgcaagccggggctgcccagctggcagggtatcttggggataccattgttaacccaacc
gatgcgcgggtcttgatcgtctctattgctcctttagtgctggtgctcttccaagggctt
ggccagttcatgggcagttattccatgaactgggtagctcaacaaatcgtctacgtattg
cgcaatgatgtgttcgagcatgttctgaaacttccccagtcggaataccatcgcaacgct
tccgggcgcatcatgtcgaagattatcttcgatgcccagcaggtcaccagtgccggtacg
gatgcaatcatcgtgattattcgcgaaggtctgacggtgatagggctgttcagttttctg
ctatggcagaactggaagctgacgttaattctggtgacagtggttcctctgattgcactg
gtgatgaatatcaccagtaaacggttcaggaaaattagccgtcgtattcagtcttccatg
gctaacattactcactttttgggtgaggccattgaaggcagtggcgaggtgaaaattttt
ggtggccaggctcaggaggcagaccgttttcataacgtaagtcgtagctttgccaaacag
aacgtgaaactcaacgctagcaagatcgcaagcacggtgatcgtgcaattgtttgtggcg
gtgggtattggcttcattacttatttgtatattcacctgatgggcgaagatcttacggtg
gggggctttctgtcttatatcaccgctgccggcatgatccaaaaaccgctcaagcagctc
acggatgtgaatgtgaaggttcagcgcggtgtcaccggtgctgccagtctgtttgagctg
cttgatactgagcaggaaacggatacgggtacctatactgtagcgaccaaggttgacggc
aatatcgactttgaaggggtgagctttggttatgatccggcctcaccggtggtgcgtcag
ctcaactttgcgatcaaggccggggaaactgtggcgctggtggggcgctccggagcaggc
aaaagtaccattagcgcgatgctgccgcgcttttttgatccagaccaaggccgtatttta
cttgatggtattcccttgcaggagtatcagctgagcgagttgagaaaccagattgcgatg
gtgagtcagcgagttgttctgtttaacgacagcgtgcgtaacaatattgcctacggtgag
ctacgcagctcagacgatgcgtccatcataaaagcagcaaaggacgcccatgcctggtcc
tttattgagcagcttgaacatggcttggataccttgttgggccaagacggtgtgcaattg
tccggtggtcagcgtcagcgcattgcgattgcgcgggcgttgctcaaggatgccccggtt
ttgattcttgacgaagcgaccagtgcactggactctgagtccgaacaccatatccagcag
gcgctggagcaggtgatgcaaggccgcactaccttggtcattgcccatcgcctgtctacc
attgaaaaagcggatcgcattatggtgcttgatcaaggccagttgattgagcagggttcc
caccagcaattactggaaaaaaacgggctgtatacgcaaatgtaccggatgaacttttcc
gaggagtaa
DBGET
integrated database retrieval system
