Alcanivorax sp. NBRC 101098: AS19_12270
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Entry
AS19_12270 CDS
T03879
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
aln
Alcanivorax sp. NBRC 101098
Pathway
aln03030
DNA replication
aln03430
Mismatch repair
aln03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
aln00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AS19_12270
03430 Mismatch repair
AS19_12270
03440 Homologous recombination
AS19_12270
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
aln03032
]
AS19_12270
03400 DNA repair and recombination proteins [BR:
aln03400
]
AS19_12270
Enzymes [BR:
aln01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
AS19_12270
DNA replication proteins [BR:
aln03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
AS19_12270
DNA repair and recombination proteins [BR:
aln03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
AS19_12270
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DNA_pol_IIIA_C
HROB
tRNA_anti_2
Motif
Other DBs
NCBI-ProteinID:
BAP14078
UniProt:
A0AAD1EYG0
LinkDB
All DBs
Position
1345385..1348885
Genome browser
AA seq
1166 aa
AA seq
DB search
MTDPRFVHLRLHTDYSLVDGIVRVKELTKTCVNEQIPAVAVTDDSNLFALIKFYQNAMNA
GIKPLMGADLWVQGTHIDEPAYLSFLVLNEVGYQNLTLLISRAWQTNQDRGRALVKPEWL
AELNEGLIVLSAASQGEVGQLLLAGKHEQAQQYARWLVSTYGDRFYLEVQRTSRPGDEDC
LHASVALAEQLGLPVVATNDVRFLRREDFEAHESRVCIHDGNTLDDPRRPKKYSEEQYLK
SADEMAQLFSDLPEALENTVEIARRCTLDIRLGENFLPDFPIPEGMTIEQYFEKVSHDGL
EERLKVLLDSDDPEYALKRKDYDDRLRFELDIINQMGFPGYFLIVADFIQWAKDNEVPVG
PGRGSGAGSLVAYALKITDLDPIGYDLLFERFLNPERVSMPDFDVDFCMEKRDRVINYVA
DKYGRDAVSQIITFGTMAAKAVVRDVARVQGKPYGLADRLSKMIPGVPGMTLSKALEQEE
TLREFLESDENSDKEAANEIMEMAFKLEGLTRNVGKHAGGVVIAPGKLTDFAPLYCEEDG
TNLVTQYDKDDVESAGLVKFDFLGLKTLTIIDWAVKAANVKRAREGLDDLVIDHIPLDDS
PSFDLLKRGDTTAVFQLESQGMKELIKKLKPDVFEDIIALVALYRPGPLESGMVDNFVNR
KHGREPLAYPDPQYQHEWLEPILKPSYGVILYQEQVMQIAQELAGYTLGGADMLRRAMGK
KKPEEMEKQRAIFEEGAKGKGVDAGLAMKIFDLVEKFAGYGFNKSHSAAYALVAYQTAWL
KVHYPAEFMAATISADMQNTDKVVTFIDECKTMGLQVLPPDVNSCGYRFTVNPEGDIVYG
LGAIKGLGEGPIEAIVTARAEGGEFKDLFDFCRRIDLKKINRRSLEAMVRAGVLDKLGLN
SSFHDRAQLLATLPDAIAAADQDARNEAAGIMDMFGAMDDSPATAVEWKPARSWNDETRL
NGERDTLGLFLTGHPIDQYEKEVQQFVTARINALQPTAKGEAATVAGLVVALRITRSKRS
GERMAFITLDDKTGRVEVSVFGKTFAEYGELVQKDTLLIFKGGVRNDEYTGSFNLVADEI
MDMRQAREAFARRLRVAVPIEEGLPEQLQQMLSPYQGGNTPVLLDLDHSIAAASFWLGDE
WKVSPHESLVEELRIRFGEDAVRMEY
NT seq
3501 nt
NT seq
+upstream
nt +downstream
nt
ttgactgatccccgttttgtccacctgcgccttcataccgattattcactggttgatgga
atcgttcgggttaaggaactgaccaagacctgcgtaaatgagcagattcctgcggtggca
gtcaccgatgattcgaatttgtttgccctgatcaagttctatcagaatgccatgaatgcg
ggtatcaaaccgttgatgggggcggatctctgggtgcagggcacgcacatagacgaaccc
gcctatctgtcgtttctggtgcttaatgaggtgggttatcagaacctgactttactgatt
agtcgtgcttggcagactaatcaggatcgcgggcgcgctttggtcaaacctgagtggctg
gcagaactgaatgaaggcctgatcgtgctttcagcggcgagccaaggggaagtagggcag
ttattgctagcaggcaaacacgaacaggcgcaacagtatgctcgttggcttgtgtcaacg
tacggtgatcgtttctatctggaagtgcagcgaacctctcgaccgggtgatgaggattgt
ttgcatgccagcgttgccttggccgaacaacttggcttgccagtggtagccaccaacgat
gttcgctttcttcgtcgcgaagactttgaagcccatgaatctcgagtctgcatccatgac
ggtaatactctggatgatccgcgacggccaaaaaaatattccgaagagcagtacctgaaa
tctgccgatgaaatggcgcagctgttttctgatttgcccgaagcgcttgagaacacggtg
gaaattgctcgccgctgcacgcttgatattcgtttaggagaaaacttcctgccggacttc
ccgattccggagggcatgaccattgagcaatatttcgagaaagtgtctcacgatggtctt
gaggaacgtcttaaggtcttgctcgatagcgatgaccctgagtatgcattaaagcgcaaa
gactacgatgaccggcttcgatttgagttggatatcatcaaccaaatgggatttcccggt
tacttcctaatcgttgccgattttatccagtgggctaaggataacgaggtgccggtggga
ccggggcggggttcaggtgcaggctcactggttgcctatgctttaaaaattaccgatttg
gatcccattggttacgacctcctgttcgaacggttcctgaaccccgaacgggtatccatg
cctgactttgacgtcgacttctgcatggagaagcgcgaccgtgtaatcaactatgtggcg
gataagtacggccgtgatgcagtgagccaaatcatcacattcggtaccatggctgccaag
gccgtagtgcgcgatgtggcgcgggtgcaaggtaagccctatgggctagcggatcgactt
tccaagatgattcccggggtgcctgggatgaccttgagcaaggcgttggagcaggaagaa
actttgcgcgagtttctggaaagcgatgaaaattccgacaaagaagccgccaatgaaatc
atggaaatggctttcaagctggaaggcttgacccgtaacgtgggtaagcatgctgggggg
gtagtgatcgccccgggcaagctcactgactttgcgccgctgtactgtgaagaagatggc
accaacctggtgacgcagtacgataaagatgacgtggaatccgcgggccttgtgaaattt
gactttctcggcctgaaaaccctgaccatcattgactgggccgtcaaagcggccaatgtg
aagcgtgctcgcgaagggttggacgatcttgttatcgatcatatcccgctagatgacagc
cccagttttgacctattgaagcggggcgataccaccgcggtattccagctggaaagtcag
ggcatgaaggagctaattaaaaagctcaagcctgacgtttttgaagacattatcgcattg
gtggctctgtatcgtcctgggccgctggaatctggcatggtggataatttcgtcaaccgt
aagcacggtcgcgaacctttggcctatccggaccctcagtaccaacacgagtggctggag
cctatcttaaaaccttcctacggggtcatcctgtatcaggaacaggtgatgcagattgcc
caggagctggccggttatacactgggtggcgccgacatgttgcgccgggctatgggtaag
aagaagcctgaagagatggaaaagcagcgggcgatctttgaagaaggggcaaaaggaaag
ggggtagacgcgggcctggccatgaaaatctttgatttggtggagaaattcgcaggctac
ggtttcaacaaatcccactctgcagcttacgccttggtcgcgtatcaaaccgcctggcta
aaggtccattatcctgcggagtttatggcggccaccatttctgccgatatgcagaacacc
gacaaggtggtgacgttcattgatgaatgtaaaaccatgggtttgcaggtactgccaccg
gatgtgaattcctgtggttaccgctttacggtgaacccggaaggcgacatcgtttatggt
ttgggcgccatcaaggggctgggtgaagggcccattgaagctatcgtcactgcacgggcc
gagggtggtgaattcaaggatttgtttgatttttgccgccgtattgacctgaaaaaaatc
aatcgccgttctctggaggccatggtgcgcgctggtgtgctggataagctgggtctaaac
agcagcttccatgatagggcgcaattgctggccaccttgccggatgcgattgcggcggcc
gaccaggatgcccgcaacgaagccgcgggtattatggatatgttcggggcgatggatgac
agtccggccactgccgtggaatggaagccggctcgttcctggaatgacgagacccgcctc
aacggtgagcgagatactctcggcttgtttttaactgggcaccccattgatcagtatgaa
aaagaagttcagcagttcgttactgcccggattaacgccctgcagcccacagccaagggg
gaggcggccactgtggctgggttggtcgtggcactgcgtattacccgtagtaaacgcagt
ggtgaacgaatggcatttatcaccctggatgacaaaaccggacgggtggaagtgtctgta
ttcggtaagaccttcgctgagtacggcgagttggtgcagaaagatactttgctgatcttt
aagggcggggtgcgcaatgatgagtacaccggtagctttaacctagtagccgatgaaatc
atggatatgcgccaagcccgggaagcgtttgctcgtcgtctgcgagtggcggttcccata
gaggaaggcttacccgagcagcttcagcaaatgctgtcgccgtatcaggggggcaatacg
ccagtattgctggatctggatcacagcatcgccgccgcgagcttttggctgggtgacgaa
tggaaggttagccctcacgaatcgcttgtggaagagctgcgaatccgctttggagaagac
gcagtacggatggagtactaa
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