Alcanivorax sp. NBRC 101098: AS19_12700
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Entry
AS19_12700 CDS
T03879
Name
(GenBank) 2'-5' RNA ligase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
aln
Alcanivorax sp. NBRC 101098
Brite
KEGG Orthology (KO) [BR:
aln00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
aln03016
]
AS19_12700
Enzymes [BR:
aln01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
AS19_12700
Transfer RNA biogenesis [BR:
aln03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
AS19_12700
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Paralog
Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
DUF7409
Motif
Other DBs
NCBI-ProteinID:
BAP14121
UniProt:
A0AAD1B596
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All DBs
Position
1391896..1392342
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AA seq
148 aa
AA seq
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MGLATPAANLHLTLAFLGEQSASDLNGLKGSVSALADKHASFAQLFDRCEPFPRDQGPFI
ALTGKASSPLQQLHAGLEECLEFHGLPLESRSFRPHITLARPGAAVTSFQTMGEWVLPVN
ALWLYRSEWAEPLPTYECLARFALKTAL
NT seq
447 nt
NT seq
+upstream
nt +downstream
nt
atggggcttgctacccccgcggcaaatctacaccttaccctcgcgtttttgggtgaacag
agcgcatcggatctgaatggcttaaaaggatcggtgtcagcactggccgataagcatgcg
tcgtttgcacagctcttcgatcgctgtgagccgtttccccgtgatcaagggccgtttatt
gcgttaacagggaaggccagttcgccgcttcagcagctccacgctggcctggaggagtgt
cttgaatttcacggcttgccgttggagagcaggtcgtttcggccacatattactctggct
aggcctggggctgcggtgacgtcttttcagactatgggtgagtgggtgttgccggttaac
gcgctgtggctatatcgtagtgagtgggctgagccgttgccgacgtatgagtgtctggca
cgatttgccttgaaaactgcgctgtag
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