Alcanivorax sp. NBRC 101098: AS19_19570
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Entry
AS19_19570 CDS
T03879
Name
(GenBank) ATP-dependent helicase HepA
KO
K03580
ATP-dependent helicase HepA [EC:5.6.2.-]
Organism
aln
Alcanivorax sp. NBRC 101098
Brite
KEGG Orthology (KO) [BR:
aln00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aln03021
]
AS19_19570
Transcription machinery [BR:
aln03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
AS19_19570
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RapA_C
Tudor_1_RapA
Helicase_C
SNF2-rel_dom
Tudor_RapA
ResIII
DEAD
Transglut_core
AAA_34
DUF6771
Motif
Other DBs
NCBI-ProteinID:
BAP14808
LinkDB
All DBs
Position
2163879..2166770
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AA seq
963 aa
AA seq
DB search
MTDFIPGQRWLSESETELGLGIIKELDYRLVTVEYPAVEEERTYAKNNAPLSRVTFDSGD
TIRTADEMELVVTDVNELNGLKIYMAHPKDGSPEDIQPVPETNLGHTLRLTAALDRLLSN
QLSSNRWFELRIDALNAHCRQQQSAIKGLRGPRIDLIGHQLYIADQVANRFAPRVLLADE
VGLGKTIEAGLILHQQLLTGRAKRVLVVVPSPLVHQWFVEMVRRFNLHFSIFDAERLNAL
QPETSIKDMLAQIIEEENSPNDGADEAASGDDNPFLSEQLILCSTDFLSECDIEQLAAAD
WDLLVVDEAHHLEWSAQQASDDYQRVETIAKQARGLLLLTATPEQLGLESHYARLRLLDP
ERYPSLEAFKEEQTHYQDVAALAGRLHDESKWDEALKQEAVALLPDMDIDESNREAIQAE
LLDRSGPGRVMFRNTRHNIAGFPARHVHGIPLTLPDEYKYDSDEEIDGHLHPETLFHDDR
WCTLDPRVTWLENFFKQHRHDKVLVICASKNTATDLHAHCNYKLGMNVAMFHEDMDLIER
DRAAAFFADDFDGAQALICSEIGSEGRNFQFAHHLVLLDLPLNPDLLEQRIGRLDRIGQT
DDIQIHVPYFEQHAQEVLFRWYHEGMNAFEHTNPAGHDIYLRSRDALEPLLTGDPEYTAI
EALVDDTRAITTELHTLLETGRDRLLELSSFDGERAETLISDLIAADEDSPLPFMQRIFD
RYGVEQEDHSDTAVILKPGPHMRDAFPSLPEEGVTMTDNRATALARDDMQFLTWEHPMVT
GSLEMMLTEHRGKAAVSLLKNPKIKAGTLLIEAIYTVDAVAPKHLQADRFLPTTVIRHLL
DANGKNISQAISHDGLSQQCHKMDKPLSRKIVGSQKALLEKLLKADDISASQEAESIITA
AQQKMREKQAHELARLKALQAKNPAVRHAEIDALEDQTQALEKCLGEARCQLEAVRIIVA
GGD
NT seq
2892 nt
NT seq
+upstream
nt +downstream
nt
atgactgactttattcccggccagcgctggctgagcgaatccgaaactgagctgggccta
ggcatcatcaaggaattggattaccgactggtcaccgtggaatacccggcggtagaggaa
gaacgcacctacgcaaagaacaatgcccccttgtccagggtcacctttgacagcggcgat
accattcgcaccgccgatgaaatggagctagtggtcaccgacgttaacgagcttaatgga
ctcaagatctacatggcccaccccaaggacggcagcccggaggatatccagccggtacct
gagaccaatcttggccataccctacgactgaccgcagccttagaccgcctgttatccaac
cagctttcctccaaccgctggttcgagctgcgtattgatgcactcaatgcccattgccgc
caacagcaatctgccattaaagggctacggggccctcgcattgatctgattggtcatcag
ctatacatcgctgaccaagtggctaatcgctttgccccccgggttttgcttgccgacgaa
gtcggcttgggaaaaactattgaagcagggctgatcctgcatcaacagttgctcactggt
cgtgccaaacgagtgctggtggtcgtaccatcgcccctggtccaccaatggtttgtggaa
atggtgcgccgtttcaatctgcatttttccatttttgatgctgaacgcctgaacgctctg
cagccagaaaccagtatcaaagacatgctggcgcagattattgaagaggaaaactccccg
aacgacggcgctgacgaagcggccagcggtgacgacaatcccttcctcagtgaacagctg
attttgtgcagcacggactttctaagcgagtgcgacattgagcaactggcagctgccgat
tgggacttgctggtggtcgacgaagctcaccacctggaatggtcagcacaacaggccagc
gacgattaccagcgcgtggaaaccattgccaagcaagcccgaggcctactgctgcttacc
gctaccccggaacagctcggtcttgaaagccactatgctcgattacgcctgctcgacccg
gaacgctaccccagcctagaggctttcaaggaagaacaaacccattatcaagacgtggca
gcgctggccggccgactgcacgatgaatccaaatgggatgaggcactcaagcaggaagcc
gtggccctactaccagacatggacattgacgaaagcaaccgcgaagcgattcaagcagaa
ctgctggatcgctcaggccccggccgcgtcatgttccgtaacacccgccacaacattgcc
ggcttcccggcacgtcacgtacacggcatccctcttacgctgccagacgagtacaaatac
gacagcgacgaagaaattgacggccatttgcacccggaaaccctgttccacgatgatcgt
tggtgcaccttggaccctcgcgtcacttggctggaaaactttttcaaacagcatcgccac
gacaaggtactggtgatctgtgctagcaagaataccgccaccgacctgcatgcccactgc
aactacaagctaggcatgaacgtggccatgttccatgaagatatggacctgatcgaacgc
gaccgggccgccgctttctttgccgacgactttgatggcgcccaagcactgatttgctcg
gagatcggctctgaaggccgtaacttccagttcgctcatcatctagtcctgctggattta
cccctaaaccctgatctgctcgaacagcgtatcggccgcttggaccgtatcggccaaacc
gacgacatccagattcacgtgccctacttcgagcaacacgctcaggaagtactgttccgc
tggtaccacgagggcatgaacgcgttcgagcacaccaacccggctggccacgatatttac
ctgcggagccgcgacgcactagagcctctgcttaccggtgacccggaatacactgccatc
gaagcactggtggacgatacacgcgccattaccaccgagctacacacactgcttgaaacc
gggcgtgaccgcctgctggagctgagctcatttgatggtgagcgcgcagaaaccctgatc
tccgatttgattgccgcagatgaggacagcccactgcctttcatgcaacgcatctttgat
cgttatggtgtcgaacaggaagatcactccgataccgcagtgatactcaaacccggcccc
cacatgcgtgatgcctttccctccctgccagaagaaggggtcaccatgaccgataaccgt
gccaccgcattggcacgggacgacatgcagtttctcacctgggagcaccccatggttact
ggcagcttggaaatgatgctcactgagcatcgtggtaaagcggctgttagcctgctgaaa
aaccccaaaatcaaagccggcacactgcttatcgaagctatttacaccgtagatgctgtc
gccccgaaacatcttcaggcagatcgctttttacccaccacggtgatccgtcaccttctt
gatgccaatggcaaaaatatcagccaggcgatcagtcacgacggtttaagccagcaatgc
cacaaaatggataagccgctgagccgcaaaattgtcggcagccaaaaggccttgctggaa
aaactgctcaaagccgatgacattagcgccagccaggaggcagaaagtatcatcaccgct
gcccagcaaaaaatgcgcgagaaacaggcccatgagctggctcgccttaaagcgctgcaa
gccaaaaacccggcggtaaggcacgcagaaatcgacgcactggaagaccaaacccaggcg
ctggaaaaatgcctcggcgaagcccgttgtcagcttgaagccgtacgcatcattgtcgcg
ggaggagattaa
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