KEGG   Alcanivorax sp. NBRC 101098: AS19_19830
Entry
AS19_19830        CDS       T03879                                 
Name
(GenBank) ATP-dependent RNA helicase RhlB
  KO
K03732  ATP-dependent RNA helicase RhlB [EC:5.6.2.7]
Organism
aln  Alcanivorax sp. NBRC 101098
Pathway
aln03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:aln00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    AS19_19830
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:aln03019]
    AS19_19830
Enzymes [BR:aln01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     AS19_19830
Messenger RNA biogenesis [BR:aln03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     AS19_19830
SSDB
Motif
Pfam: DEAD Helicase_C ResIII Utp25_C ERCC3_RAD25_C Hydrolase AAA_30
Other DBs
NCBI-ProteinID: BAP14834
UniProt: A0AAD1B2T8
LinkDB
Position
2191050..2192318
AA seq 422 aa
MQKDKASSWSLEQFQVPEKEGERRFHDFDLHLDLMHGIADSGFQYCTPIQAEVLEHTLAG
ADAIGRAQTGTGKTAAFLITVINDLLKHPIDVQRFAGEPRALIVAPTRELAMQIEKDANI
LTKYTDLQVMSVVGGMNFNRQQERLQNKLIDILVATPGRLLDFAKRRDLWLDRVEFLVLD
EADRMLDMGFIPDVKRIVGMTPKSQYRQTQLFSATFNDDVMNLSRRWTQDAEIVEIEPTQ
VTTDTVEQKVYITNTDDKFKLLYNLITGMNMDKVIVFANRRDITRRVCDRLQKRGLKVSL
ISGDVPQTQRSKTLERFRAGDLQVLIATDVAGRGIHIDGVSHVVNYNLPEDPEDYVHRIG
RTGRAGASGMSISFACEDDAFLLPELENAIGMKLECEYPPADLLAERERSASAKAPDAEK
KD
NT seq 1269 nt   +upstreamnt  +downstreamnt
atgcaaaaagacaaagcaagctcctggagcctggagcaatttcaggttccggaaaaagaa
ggcgaacgccgctttcacgactttgatctgcatctggacctgatgcacggcatcgccgat
tcgggcttccagtactgcacgcctattcaggctgaagtcctggaacataccctcgctggc
gccgatgccatcggccgggcccaaacgggtaccggcaagacagccgctttcctgatcact
gtaataaacgatttgctcaaacatcctatcgatgtccaacgctttgccggtgagcctcgc
gccctgatcgtggcccccacccgagaactggccatgcagattgagaaggacgccaacata
ctgaccaagtacaccgaccttcaagtaatgagtgtggtgggcggcatgaacttcaatcgg
caacaggaacggctgcaaaacaaactgattgatatcttagtggccacccccggtcgtctt
ctcgatttcgccaaacgccgcgatctgtggctggaccgggtcgagtttctggtgttggat
gaagctgatcgcatgctggacatgggcttcattcccgacgtgaaacgcattgtcggcatg
acgccgaaaagccagtatcgccaaactcaactgttctctgccacattcaatgacgatgtg
atgaacctctcccgccgctggacgcaagatgctgaaatcgtggagatagagccaacccaa
gtcaccactgataccgtagagcaaaaggtctacatcactaatacagacgacaagttcaag
ctgctctataacctcattaccggcatgaacatggacaaggtcatcgtatttgccaaccgt
cgagacattactcgccgggtgtgcgaccggctacaaaagcgggggcttaaagtctccctg
atttccggcgacgtcccacaaactcaacgaagcaaaacactggagcgcttccgagccggc
gacttgcaagtgcttattgccacggacgtggccggccgcggcatccacattgatggcgtc
tctcacgtagtgaattacaatctgcctgaagatccggaagactatgtgcaccgcattggt
cgtaccggtcgcgctggtgccagcggtatgtcgatcagtttcgcctgtgaagatgacgcc
ttcctgctaccagagctggaaaacgccatcggcatgaaactggaatgcgaataccccccc
gccgacctgctggcggaaagggagaggtcagcctccgcgaaagcgccagacgcagagaaa
aaggactga

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