Alcanivorax sp. NBRC 101098: AS19_22590
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Entry
AS19_22590 CDS
T03879
Name
(GenBank) DNA mismatch repair protein
KO
K03572
DNA mismatch repair protein MutL
Organism
aln
Alcanivorax sp. NBRC 101098
Pathway
aln03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
aln00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
AS19_22590
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aln03400
]
AS19_22590
DNA repair and recombination proteins [BR:
aln03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Molecular matchmaker
AS19_22590
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutL_C
DNA_mis_repair
HATPase_c_3
HATPase_c
Motif
Other DBs
NCBI-ProteinID:
BAP15110
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Position
complement(2494314..2496182)
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AA seq
622 aa
AA seq
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MSKIQLLDSRLANQIAAGEVVERPASVLKELLENALDAGSESISVDVEQGGVKLLRVRDN
GSGIERDDLPLALSRHATSKIRGLDDLEAIGTLGFRGEALAAISSVSRLSLASNVEGEPE
GWQVTVEGRDMAPSVSPAGHPRGTTVTMRDLFFNTPARRRFLRTEKTEFNHLEEVFRRIA
LSEFNTAFRLTHNQKVIHQLPAGLDDTLRAARVAKLCGKGFIEQAVPVDVERDGLRLHGW
MGLPTFSRSQADLQYFYVNGRVIRDKVVSHAVRQAYSDVLYHGRHPAYVLFLELDPAMVD
VNVHPTKHEVRFREQRMVHGFLYSSLHRVIAGVRPGQELAGSVADEGGPAAGMDAAMAPS
QGNMSLTSPTGSGGSLSHPAGQAYPSTGGGVFGYGQGARQADAYGALVRGHVGESAPAVM
PPANENETVPPLGYAVAQLHGIFILAENEQGMVVVDMHAAHERITYERLKQSWAEDKVRS
QPLLVPVSLAVSSREADFAEQQPEVFSRLGFVVQRAGPETLVVREVPALLRNGDSESMVR
DVLSDLLAEGSSERIAQKLDELLSTMACHGSVRANRRLTIAEMNALLRDMEATERSGQCN
HGRPTWTQMSIKDLDRLFMRGQ
NT seq
1869 nt
NT seq
+upstream
nt +downstream
nt
ttgtccaaaattcagctgcttgattcccgccttgctaaccagattgccgccggtgaagtg
gttgagcgccccgcgtctgtgctcaaagagctgctggagaatgcgctggacgctggctcg
gaatccatcagtgtggatgtggagcagggcggggtgaaactgctgcgggtacgcgacaac
ggcagtggcatcgagcgcgatgatttaccgctggctctgtcgcgccatgccaccagcaaa
atccgggggcttgatgatctggaagccattggcacgttggggtttcgcggtgaggctctg
gcggcgatcagttctgtctcccggttgagtctggccagtaatgtggagggggagccggaa
ggttggcaggtgaccgtggaggggcgtgatatggcgccgtcagtatcgccggcagggcat
ccccgtggcaccaccgtcaccatgcgcgatttgttcttcaatactccggcgcggcgtcgt
ttcctgcgcaccgaaaaaacggaattcaatcatctcgaagaggtgttccggcgcattgcc
ctgagcgaattcaataccgcttttcgtcttacccataaccagaaagtgattcaccagctg
cctgctgggttggatgacactttgcgggcagcgcgggtggccaagctgtgtggcaagggc
ttcattgagcaggcggtaccggtggatgtggagcgtgatggtttgcggctgcatggctgg
atggggctgcccactttttcccggtcccaggcggacctacagtatttctatgtaaatggt
cgggtcatccgggacaaggtggttagccatgcggtgcgtcaggcttactcggatgtgctt
tatcatggccgccatccagcctatgtgctgtttctggaactggatccggccatggtggat
gtgaatgttcaccccaccaagcacgaagtgcgtttccgcgagcagcgcatggtgcatggt
ttcttgtatagctcgctgcaccgtgtcattgccggggtgcggcccggccaggaactggcg
ggttcagtggccgatgaaggcgggccagctgcagggatggatgcagccatggcgccgagc
cagggtaatatgtcgctgacttcgccgacgggctcggggggctccctgtctcatcctgcc
gggcaggcttatccttccacggggggaggcgtgttcggctatggccagggcgcacgtcag
gcggatgcttatggggcgttggtccgtgggcatgtaggtgagtcggcgccggcggtaatg
ccgccggccaacgaaaatgaaacggtaccgccattagggtatgcggtggcgcaattgcac
ggcatttttattttggcggagaacgagcaagggatggtggtggtggatatgcacgccgcc
cacgaacggattacctacgaacggctcaagcagagctgggcggaagacaaggtgcgtagc
cagccgttgctagtgccggtgtcgctggcggtgtcatcccgggaggcggactttgctgag
cagcagccggaggtcttttccaggctggggtttgtggttcagcgtgctgggccggagact
ctggtggtgcgcgaagtgccggcccttcttcgtaatggcgacagcgaatccatggtgcga
gatgtgctatcggacctgctggccgaaggcagcagcgaacgcattgcgcaaaagctcgat
gagctgctgtctactatggcctgccacggcagtgtgcgtgccaatcgccgcctcaccatt
gcagaaatgaacgcgctgttgcgtgatatggaagccactgagcgttccggccaatgcaac
catggccggcccacctggacccagatgagtattaaggatctggatcgactgttcatgcgg
gggcaatga
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