Alcanivorax sp. NBRC 101098: AS19_23920
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Entry
AS19_23920 CDS
T03879
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
aln
Alcanivorax sp. NBRC 101098
Pathway
aln00300
Lysine biosynthesis
aln00470
D-Amino acid metabolism
aln01100
Metabolic pathways
aln01110
Biosynthesis of secondary metabolites
aln01120
Microbial metabolism in diverse environments
aln01230
Biosynthesis of amino acids
Module
aln_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
aln00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
AS19_23920
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
AS19_23920
Enzymes [BR:
aln01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
AS19_23920
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
BAP15243
UniProt:
A0AAD1B250
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Position
2636858..2638099
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AA seq
413 aa
AA seq
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MDHFQYRDGELFAEELPVEQLADRFGTPLYLYSRAALERHYLAFDEAFGDHPHQVCYAVK
ANSNLAVLNVLARVGAGFDIVSGGELERVLRAGGDPDKIVFSGVGKTANEMAAALKANIH
CFNVESAAELELLNLVAGELDREAPIAIRVNPDVDAQTHPYISTGLKDNKFGVDITKAPA
LYQRAAELPHIKILGIDCHIGSQLTKLDPFEAALERVLKLLAQLQEHGIEIHHLDLGGGL
GVTYDDETPPDRSDYVQALLKHIPGELPVHIEPGRSIAANAGIFVTQVLFLKPTEHKNFA
IVDGAMNDLIRPSLYSAWQNIVPVKPHEADCRNWDIVGPVCETGDFLGKDRALALETGDL
LAVRSAGAYGFAMASNYNSRNRPAEVMVDGDQAFVVRQRETYDEQLKLESLLP
NT seq
1242 nt
NT seq
+upstream
nt +downstream
nt
atggatcattttcagtaccgcgacggagaattgtttgccgaagagctgccggtagagcaa
ctggcggaccgcttcggcacgccgctctatctgtattcccgggcggcgttggaacgtcac
tacttggcgttcgacgaagcgttcggtgatcatcctcatcaggtgtgctatgcggtaaaa
gccaactccaatctggccgtgctgaatgtactagcccgggtcggcgccggtttcgacatt
gtttccggtggcgaactggaacgcgtgctgcgtgccggcggcgacccagacaaaattgtt
ttctccggagtcggcaaaaccgccaacgaaatggccgccgccctgaaagccaacatccac
tgtttcaacgtggaatccgccgcggaactggaattgctgaacctggtggccggcgagctg
gaccgggaggcgccgatcgccatccgcgtgaacccggatgtggacgcccagacccacccc
tatatttccaccggtttgaaagacaacaagttcggcgtggacatcactaaagcccccgcc
ttgtatcaacgagccgctgagttaccgcacatcaagatactgggcatcgattgccatatc
ggcagccagctcaccaaactcgatccattcgaagcggccttggagcgggtattgaaactg
ctggcccaactgcaagagcacggcatcgagattcatcatttggatttgggtggcggccta
ggcgtgacctacgacgacgaaacgcccccggatcgctcggactatgtgcaggccttgctc
aagcacattcccggcgagcttcccgtgcacatcgaaccagggcgctccattgctgccaat
gcaggaatttttgttactcaagtgctgtttctgaagcccaccgagcacaaaaatttcgcc
atcgtcgacggcgccatgaacgatctgattcgccccagcctctactccgcctggcagaac
attgtgccggtaaaaccccacgaggcggactgccgcaactgggatattgtcgggccagtg
tgcgaaaccggcgacttcctgggcaaggaccgggccctggcactggagaccggcgacctg
ctggccgtacgcagtgccggcgcctacggcttcgccatggccagcaactacaacagccgc
aaccgccccgccgaagtcatggtggatggcgaccaggcctttgtcgtgcggcaaagggaa
acctatgacgagcaattgaaactggaatcgttactgccatag
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