Alcanivorax sp. NBRC 101098: AS19_27170
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Entry
AS19_27170 CDS
T03879
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
aln
Alcanivorax sp. NBRC 101098
Pathway
aln03030
DNA replication
aln03410
Base excision repair
aln03420
Nucleotide excision repair
aln03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
aln00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AS19_27170
03410 Base excision repair
AS19_27170
03420 Nucleotide excision repair
AS19_27170
03440 Homologous recombination
AS19_27170
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
aln03032
]
AS19_27170
03400 DNA repair and recombination proteins [BR:
aln03400
]
AS19_27170
Enzymes [BR:
aln01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
AS19_27170
DNA replication proteins [BR:
aln03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
AS19_27170
DNA repair and recombination proteins [BR:
aln03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
AS19_27170
NER (nucleotide excision repair)
GGR (global genome repair) factors
AS19_27170
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
HHH_5
UPF0261_C
Motif
Other DBs
NCBI-ProteinID:
BAP15568
UniProt:
A0AAD1B352
LinkDB
All DBs
Position
2974772..2977531
Genome browser
AA seq
919 aa
AA seq
DB search
MSAAEKPIILVDGSSYLYRAFHALPPLTTSSGQPTGAVRGVASMLRKLIKDYDPQYMAVI
FDAKGKTFRDELFEEYKSNRPPMPDDLRAQVQPLHDLIRAMGLPLIIEDGVEADDVIGTF
ARIFGAQGKPVLISTGDKDMAQLVTEHVTLINTMNNALYDIEGVKQKFGVGPELIIDFLA
LMGDKVDNIPGVPGVGEKTALGLIQGLGSLENIYANLDKVAELSFRGAKTMAKKLEEHKE
MAFLSYQLATIKLNCELSEDLNDLKLGEPDNESLARYFKELEFKGWLSEVLSGADASVVA
AAEEAGSDEAAPAAGFSRDAYDIVYSEAMLDKWLDKLKAAGEFAFDTETTSLNYMNAELV
GFAVAVSDKAAYIPFGHNYPGAPDQIDKQLVIDKFKPLLEDDSLKKIGQNLKYDMSVLAE
DAGITLRGVAFDTMLESYVLDSVATRHDMDSLSLKYLGRKTISFTDIAGKGAKQLTFNQI
GLHEASPYAAEDADVTLRLHQTLWPKLEAEDRLPEVFRDIELPLVTVLSRIERNGTYVDA
TLLKHQSQFLAKRMAELQEKAFDIAGQEFNLASPKQLGEILYEKLEIPVIKKTPKGAPST
AEAVLQELAHDYPLPQVIMDYRGVAKLKNTYTDKLPELINQRTGRVHTSYHQAVTATGRL
SSSDPNLQNIPVRSEEGRKIRQAFLAPKGKKIVACDYSQIELRIMAHLSGDKGLTDAFEQ
GLDIHRATAAEVWGKTLDEVSDNDRRNAKAINFGLIYGMSAFGLAKQLGLPRKEAQEYID
LYFERYPGVKKYMEDTRALAIDKGYVETVYGRRLYLPEIHSKNGQRRQGAERAAINAPMQ
GTAADIIKKAMIKVHDWLETTHFDAKMIMQVHDELVFEVADDQVDDLVKEVKARMESAAE
LKVPLIVDAGAGENWEEAH
NT seq
2760 nt
NT seq
+upstream
nt +downstream
nt
atgtccgcagccgaaaaacccatcatcctggtcgatggttcctcctacctgtaccgtgcc
tttcacgccctgccgccgctcaccacctccagcggccagcccaccggggcggtgcgcggc
gtcgcctccatgctgcgcaaactgatcaaggactacgacccgcaatacatggcggtgatc
ttcgatgccaagggcaaaacctttcgcgacgaactgtttgaagagtacaaatccaaccgc
ccgcccatgcccgatgatctgcgcgcacaggtgcagcccctgcacgacctgatccgcgcc
atgggcctgccgctgatcatcgaagacggcgtggaagccgacgatgtgatcggcaccttc
gcgcgcatcttcggcgcccagggcaagccggtgctgatctccaccggcgacaaagacatg
gcccagcttgtcaccgagcacgtgaccctgatcaacaccatgaacaacgccctctacgac
attgagggcgtgaagcagaaattcggcgtgggcccggagctgatcatcgacttcctcgcc
ctgatgggcgacaaggtggacaacatccccggcgtccccggcgtgggcgagaaaaccgcc
ctgggcctaatacaggggctcggctccctggaaaatatctacgccaatctggacaaggtc
gccgagctcagcttccgtggcgccaagaccatggccaaaaagctggaagaacacaaagag
atggccttcctctcctaccagctggccaccatcaaactgaactgcgaactcagcgaagac
ctcaacgacctgaaactcggcgaaccggacaacgaatccctggcccgctatttcaaggaa
ctggagttcaagggctggttgagcgaagtactgtccggtgccgacgctagcgtagtggcc
gccgccgaggaagccggtagcgacgaagctgcccccgccgccggcttcagccgcgacgcc
tacgacatcgtctacagcgaagccatgctggataaatggctggataaactgaaagccgct
ggcgagtttgccttcgataccgaaaccaccagcctcaactatatgaacgccgaactggtg
ggtttcgccgtggccgtcagcgacaaggccgcctatatccccttcgggcacaactacccc
ggcgccccagaccagatcgacaagcagttggtgatcgacaagttcaagccgttgctcgaa
gacgacagcctcaagaaaatcggccagaacctgaaatacgacatgagcgtgctcgccgaa
gacgccggcattaccctgcgcggcgtggccttcgacaccatgctggaatcctatgtgctc
gattccgtggccacccgccacgacatggattccctgtcgctcaagtacctgggccgcaaa
accatcagctttaccgacatcgctggcaagggcgccaagcagctcaccttcaaccagatc
gggctgcacgaagccagcccctacgccgccgaagatgccgacgtgaccctgcgcctgcac
cagaccctgtggccgaaattggaagccgaagaccgactgcccgaggtgttccgcgacatc
gagctgccgctggtcactgtgctcagccgcatcgaacgcaacggcacctacgtggacgcc
accttactcaagcaccaaagccagttcctcgccaaacgcatggcggaactgcaagaaaag
gccttcgacatcgccgggcaggaattcaatctcgccagccccaaacagctgggcgaaatt
ctctacgaaaagctggaaatcccggtcatcaagaagacccccaaaggcgcgccgtccacc
gccgaagcggtgctacaagagctggcccatgactacccactgccccaggtgatcatggat
taccgcggcgtggccaagctgaaaaacacctacaccgacaaactgccggaactgatcaac
caacgcaccggccgcgtgcacacctcctaccaccaggcggtgaccgccaccgggcgcttg
tcttccagtgacccgaacctgcaaaacattccggtgcgcagcgaagaaggccgtaagatt
cgccaagccttcctcgcccccaaaggaaagaaaatagtcgcctgcgattactcacaaatc
gagttgcgcatcatggcgcatctgagtggcgacaaaggcctcacggatgccttcgaacag
ggcctggatattcaccgcgccaccgccgccgaagtgtggggaaaaaccctggacgaggtc
agcgacaacgatcgccgcaacgccaaggccatcaacttcggccttatctacggcatgagc
gccttcggcctcgccaaacaactgggcctgccgcgcaaggaagcccaggaatacatcgac
ctctatttcgagcgttaccccggcgtgaaaaaatacatggaagacacccgcgcgttagcg
atagacaaaggctacgtggaaaccgtttacggtcgccgtctctacctgccggaaatccac
agcaaaaacggccaacgccgccaaggcgccgaacgcgccgccatcaacgcccccatgcaa
ggcaccgccgccgacatcatcaagaaagccatgatcaaagtgcacgactggctggaaacc
acccacttcgacgccaaaatgatcatgcaggtacacgatgaactggtgtttgaagtggcg
gacgatcaggtggatgatctggtcaaggaagtaaaggcgcgcatggaatcagcggcggag
ttgaaagtgccgttgattgtggatgcgggcgctggggagaactgggaagaggcgcattga
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