Alcanivorax sp. NBRC 101098: AS19_27480
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Entry
AS19_27480 CDS
T03879
Name
(GenBank) DNA-dependent helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
aln
Alcanivorax sp. NBRC 101098
Pathway
aln03420
Nucleotide excision repair
aln03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
aln00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
AS19_27480
03430 Mismatch repair
AS19_27480
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aln03400
]
AS19_27480
Enzymes [BR:
aln01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AS19_27480
DNA repair and recombination proteins [BR:
aln03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
AS19_27480
MMR (mismatch excision repair)
Other MMR factors
AS19_27480
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
Viral_helicase1
AAA_12
ANTAR
Motif
Other DBs
NCBI-ProteinID:
BAP15599
UniProt:
A0AAD1B3T9
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All DBs
Position
complement(3006081..3008297)
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AA seq
738 aa
AA seq
DB search
MPSPAGITGKDILLNFRAMDDVTSLIDGLNPAQRDAVAADDQHLLVLAGAGSGKTRVLVH
RIAWQIATEQASPFGILAVTFTNKAAAEMRGRIEQLLDMSADGMWVGTFHGIAHRLLRAH
WQEAGLPQGFQIIDADDQIRLIKRVSKELGLDEQRWPARQATWFINSQKDEGLRARHMDT
GGDLFALTMQKIYFAYEEACERGGLVDFNEMLLRVLELFRDNNNLRGHYQRRFRHILVDE
FQDTNSIQYAWLRLLADENNAVTIVGDDDQSIYGWRGAKIENIHKFSRDFPDTRTIRLEQ
NYRSTGTILKAANAVIGHNSDRLGKELWTEGGDGDLIRLYSGFNEVDEARFIAGRMDKLF
QEGTARREMAVLYRSNAQSRVLEEAFLQAGIPYRIYGGQRFFERVEIKNALAYLRLLSHR
HADAAFERVVNTPTRGIGNKTLETLREVARQRNVSLWDAAQAVVSEQLLTARAINALAVF
LNLIAQLEQQCDGLSLAETTEHVIEASGLLEFHGKEKGEKGQQRLENLRELLSATREFGD
EDEDSELDSLTAFLDHAALESGEGQADAHEDAVQMMTLHSAKGLEFPVVFITGMEEGLFP
HKMSSEEPGRLAEERRLCYVGLTRAMRELYLTHAESRRLYGNENYNPPSRFLREIPAETL
EEVRARAGFSRPMGGAAKPIRETESNGISLGARVLHPKFGEGTILQFEGQGPNARLQINF
DGAGTKWLVSQYARLEVI
NT seq
2217 nt
NT seq
+upstream
nt +downstream
nt
ttgccctctccggcgggcatcaccggcaaggacattctgctaaactttcgcgccatggat
gacgtgacttcccttattgatggtttgaacccggcccagcgcgatgcggtggctgccgat
gatcaacacttgctggtgctggcgggggccggttccggcaaaacccgcgtgttggtacac
cgtatcgcctggcagattgccaccgaacaggcttcgccgttcggtattttggcggtgacc
tttactaacaaagccgctgcggaaatgcgcgggcgtattgagcagctgctggacatgtct
gccgatggcatgtgggtgggcacttttcatggtattgcccatcgcctgctgcgcgcccac
tggcaggaggccggtctcccccaaggcttccagatcattgatgcggatgaccaaatccgg
ctgatcaagcgagtcagcaaggaattgggcctggatgaacaacgctggccagcccgtcag
gccacctggtttattaatagtcagaaagacgaaggactccgcgctcggcatatggatacc
ggcggcgacctgttcgcgttgaccatgcagaagatctacttcgcctatgaagaggcctgc
gagcggggcgggttggtagatttcaacgaaatgctgctacgggtactggagctgttccgc
gacaacaacaacctgcgcggccactaccagcgtcgcttccggcacattttggtagacgag
ttccaagataccaacagcatccagtacgcctggttgcggttgctggcggacgaaaataat
gcggtcaccattgtcggtgacgatgatcagtccatttatggctggcgtggcgccaagatc
gagaacatccacaaattcagccgcgacttcccggatacccgtaccattcgcttggagcag
aattaccgttccaccggcactattctgaaagcggccaacgcggtgatcggccataacagt
gaccgcctaggcaaggaactgtggaccgagggcggcgatggcgatttgatccgcctctat
tctggtttcaatgaagtggatgaagcgcgctttattgccgggcgcatggataagctattt
caggaaggcaccgcgcggcgggaaatggcggtgctgtaccgctccaacgcccagtcgcgg
gtgctggaagaggcttttctgcaggcggggattccctaccgtatctatggcgggcaacgc
ttcttcgagcgggtggaaatcaaaaatgcactggcctatctgcgcctactcagccaccgc
catgcggatgccgccttcgagcgagtggtgaacacacctacccgcggcattggcaacaag
accctagaaaccctgcgtgaggtggcgcggcagcgtaacgtgtccctgtgggacgctgcc
caggcagtcgttagtgagcagttgcttaccgctcgagccattaatgcgttggcggtgttc
ctgaatctaatcgcccagctggagcagcagtgcgatgggttgtcgttggcggaaactacc
gagcatgtgattgaagccagtgggttgctggaatttcatggcaaggaaaagggcgagaag
ggccagcagcggctggaaaacctgcgcgaactgctttccgccacccgggaattcggtgat
gaggatgaggactccgagctcgatagcctcaccgcatttctggatcacgcggcgctggaa
tccggggagggccaggctgacgcccacgaggacgcggtgcagatgatgaccctgcactcg
gccaaggggctggaatttccggtggtctttattaccggcatggaagaaggcttgttcccc
cacaagatgtccagcgaagagccgggccggttggcggaagagcgccgcctttgctacgtg
ggcctgacacgggccatgcgcgagctgtatctgacccacgcggaaagccgccggttgtac
ggtaacgaaaattacaatccacccagccgttttctgcgagagattcccgccgaaacgctg
gaggaagttcgcgcccgtgcagggttcagccggcccatgggcggtgcggctaaacccatt
cgtgaaaccgagtctaacggcatcagcctgggtgctcgggtgttacacccgaaattcggg
gaaggtacgattttgcaatttgaagggcaggggcctaatgcgcgcctacaaatcaatttc
gatggcgcgggcaccaaatggctggttagccaatacgctcggctggaagtgatatag
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