Alloactinosynnema sp. L-07: CRK56580
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Entry
CRK56580 CDS
T04489
Name
(GenBank) Transcriptional regulator, IclR family
KO
K19333
IclR family transcriptional regulator, KDG regulon repressor
Organism
alo
Alloactinosynnema sp. L-07
Brite
KEGG Orthology (KO) [BR:
alo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
alo03000
]
CRK56580
Transcription factors [BR:
alo03000
]
Prokaryotic type
Helix-turn-helix
IclR family
CRK56580
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IclR_C
HTH_IclR
HVO_A0261_N
MarR_2
MarR
HTH_20
DUF977
HHH_5
HTH_24
TrmB
HTH_23
HTH_29
HTH_36
GntR
YycC
FbpC_C_terminal
Fe_dep_repress
Rrf2
Calponin
HTH_Crp_2
Motif
Other DBs
NCBI-ProteinID:
CRK56580
LinkDB
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Position
I:complement(1578087..1578854)
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AA seq
255 aa
AA seq
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MTASAERLSSVAAAARILREFGKHSTQLGVSQLARRVGVGKSTAHRIIWTLVEEGLLEKV
EETGLFRLTSAMRSLGASAETAQRLHEAATMPLDHLRTLTTGTLHIAILDGPDVLYIERR
EGPGTIPVFRSVGARNAAHATSSGKVLLAYLPAEQRDRLIEGMRLTPKTPRTLTSRAALI
AELTTVRQQGFAENRGESQAGMCSIAAPVRDPLGRVVASVSVAQFVEDVDAGLRHLARHV
VETAARISAGLGWSQ
NT seq
768 nt
NT seq
+upstream
nt +downstream
nt
atgaccgcgagcgcggagcggctgtccagtgtggccgccgccgcccggatcctgcgggag
ttcggcaagcacagcacccagctcggggtcagccagctggcccgccgggtcggcgtcggc
aagagcaccgcccaccggatcatctggaccctggtcgaggaagggctgctggagaaggtc
gaggagaccgggctgttccgcctgacctccgccatgcgttcgctgggcgccagcgccgaa
accgcgcagcgactgcacgaggcggccacgatgccgctcgaccacctgcgcacgctcacc
accggcaccctgcacatcgcgattctcgacggccccgacgtgctctacatcgagcgacgc
gaggggccgggcacgatcccggtcttccgctcggtcggtgcccgcaacgccgcccacgcg
acctccagcggcaaagtgctgctcgcctacctcccggccgaacagcgggaccgtctcatc
gagggcatgcggctcaccccgaagacacccagaacactcacctcgcgcgccgcgctgatc
gccgaactcaccacggtccggcagcagggcttcgccgagaaccgcggggagtcccaggcg
ggaatgtgctcgatcgcggcaccggtgcgcgacccgctcggccgggtggtcgcgtcggtg
tcggtcgcacagttcgtcgaggatgtcgacgcgggactgcgccacctggcccggcacgtc
gtggagacggccgcgcgcatctcggccgggctggggtggagccagtga
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