Alloactinosynnema sp. L-07: CRK57476
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Entry
CRK57476 CDS
T04489
Name
(GenBank) Topoisomerase IV subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
alo
Alloactinosynnema sp. L-07
Brite
KEGG Orthology (KO) [BR:
alo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
alo03032
]
CRK57476
03400 DNA repair and recombination proteins [BR:
alo03400
]
CRK57476
Enzymes [BR:
alo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
CRK57476
DNA replication proteins [BR:
alo03032
]
Prokaryotic type
DNA Topoisomerases
CRK57476
DNA repair and recombination proteins [BR:
alo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
CRK57476
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
Hint_2
PT-HINT
Hom_end_hint
Hint
Motif
Other DBs
NCBI-ProteinID:
CRK57476
UniProt:
A0A0H5CID6
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All DBs
Position
I:complement(2587072..2589939)
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AA seq
955 aa
AA seq
DB search
MARRKGPATKVDPNAFDRAGAKVFDTPVKSEIEDSYLEYAYSVIHSRALPDARDGLKPVH
RRILFSMSEQGYRPTSAYVKSSRVVGDCFVRGARVSTPEGVRPIEDIEIGDKVLDGDGVP
VQVIAVYANPVSELVRVTWSDGTTMLVTPGQRFWCAGGNAAEWVAAADLTGRRTIRAGES
DLAVVSVERAEPAPTFDIQVDSDEHAFVVEGFVVHNCMGKYHPHGDMAIYDAMVRMAQDF
SLNTPLVDGHGNFGSPDDGPAASRYTEARMSQAAMLLVGELGEDTVDFRPNYDGSLQEPG
VLPAAFPNLLVNGTSGIAVGMATNMIPHNLGEIVTAARWLVTHPDATLDKLMEFVPGPDL
PTGGMLLGLDEVRRAYETGRGVVRMRAKVEIGPLEGSRGRQAITITELPYQVGAEKIIEK
ITDEVTKSKRLTGIADVKDLTDRENGTRVVVECKVGVNPQALLADLYRLTPMESSFGINN
LVLVDGKPQTLGLKALLDVFLKHRYEVVTRRTRYRKRKREERLHLVDGLLIALLNIDAVI
KLIRGSEDAVDAKSGLMTKFKLSEIQATYILDTPLRRLTKYDKLELEGEQDKLRAEIAEL
SKILDDESVLKKVVSIELAAVAKDLAEERRTALIDGDLKEVLAASKPAGPLEVADDPCQV
ILSATGLVARTAAESEESSEARRRNGRVKHDAVAAVVHSTARGQILLVTNRGRAVKTDVL
PLPVLPEQSGTVSLTGGMAASELLDLDPGERVVGIAPLDDDASPGLALGTKQGVVKICSP
EWPVRSDDFEVITLKDGDEVIGASWLGDGSESLVFLSSDSSLLRYAASVVRPQGLKGGGM
AGINLAADAHAMFFAAVRTDDSEHGEPMVVTSTGQSVKVTPFELYPAKGRATGGVRSHRF
LKGEAGLALAWVGPRPAGSSRTGSAVELPESDPRRDGSGHAHPGPDVVGHLIERD
NT seq
2868 nt
NT seq
+upstream
nt +downstream
nt
atggcacgccgcaagggccccgcgaccaaggtcgacccgaacgccttcgaccgggcgggc
gccaaggtcttcgacacgccggtgaagtccgagatcgaggactcgtacctggagtacgcc
tactcggtcattcactcccgggccctgccggacgcgcgggacggcctcaagccggtccac
cgccggatcctgttctcgatgagcgaacagggctaccgcccaaccagcgcctacgtgaag
tcctcccgcgtcgtcggcgactgcttcgttcgaggcgcgcgggtctcgacgccggaaggc
gtgcgtccgatcgaggacatcgagatcggcgacaaggtcctcgacggcgacggggtgccg
gtccaagtaatcgccgtgtacgcgaatccggtgtcggaactggtgcgtgtcacatggtcg
gacggcaccacgatgctcgtcacgcccggccagcggttctggtgcgcgggcgggaacgcg
gcggaatgggtcgccgccgccgacctcaccggacggcgaacgattcgcgcgggcgagtcc
gacctggccgtcgtgtcggtcgagcgggccgaacccgcgccgaccttcgacatccaggtc
gactccgacgagcacgcgttcgtggtcgagggttttgtcgtccacaactgcatgggcaag
taccacccccacggcgacatggcgatctacgacgctatggttcggatggcgcaagacttc
tcgctcaacacgccgttggtcgacgggcatggaaattttggtagcccagacgatggaccg
gccgcgagcagatacaccgaggctcggatgtcccaagccgcaatgcttcttgtcggggag
cttggcgaggacactgtggacttccggccgaactacgacggttccctgcaggagcccggt
gttctgccagccgccttccccaatctattggtgaacggcacctccggcatcgccgtcggc
atggcgaccaacatgatcccgcacaacctaggcgagatcgtcaccgccgcccgctggctg
gtcacccaccccgacgccacgctcgacaagctcatggagttcgttcccgggcccgacctg
cccaccggcggcatgttgctcggcctcgacgaggtgcgccgcgcctatgagaccgggcgt
ggggtcgtgcggatgcgggcgaaggtcgagatcggaccgctggagggcagtcggggcagg
caggcgatcacgatcaccgagctgccctaccaggtcggcgccgagaagatcatcgagaag
atcaccgacgaggtgaccaagtccaagcgcctcaccgggatcgccgacgtcaaggatctc
accgaccgggagaacggcacgcgggtcgtggtggagtgcaaggtcggggtcaacccgcag
gcgctgctggccgacctctaccgcctcaccccgatggagtcctccttcggcatcaacaac
ctggtgctggtcgacggcaagccgcagaccctgggcctcaaggccctcctcgacgtcttc
ctcaaacaccgctacgaagtcgtcacccgccgcacccgctaccgcaagcgcaagcgcgag
gaacgcctgcacctggtcgacggcctgctcatcgcgctgctcaacatcgacgcggtgatc
aagctgatccggggcagcgaggacgccgtcgacgcgaagtccggcctgatgacgaagttc
aagctctccgagatccaggccacctacatcctcgacaccccgctgcgccgcctcaccaag
tacgacaagctcgaactcgaaggcgagcaggacaagctgcgcgccgagatcgcggagctg
tcgaagatcctcgacgacgagtccgtcctgaagaaggtcgtgtccatcgaactcgcggcc
gtggccaaggacctcgccgaggaacgccgcaccgcgctcatcgacggcgacctcaaggag
gtgctcgccgcctcgaagcccgcgggcccgctggaggtcgccgacgacccgtgtcaggtg
atcctctcggccaccggcctggtcgcccgcaccgccgcggagtccgaggagtcctccgag
gcacgcaggcgcaacggccgggtcaagcacgacgcggtcgccgcggtggtccactcgacc
gcgcgcgggcagatcctgctggtcaccaaccggggccgcgcggtcaagaccgacgtgctc
ccgctgcccgtcctgcctgagcagagcggcacggtctccctcaccggtggcatggcggcc
agcgaactgctcgacctggaccccggggagcgggtggtcggcatcgccccgctcgacgac
gacgcctcgcccggcctcgcgctgggcaccaagcagggtgtggtgaagatctgctccccg
gagtggcccgtgcggtcggacgacttcgaggtgatcaccctcaaggacggcgacgaggtg
atcggcgcgagttggctgggcgacggctccgagtcgctggtgttcctgtcctcggactcg
tcgctgctgcgctacgccgcgtcggtggtgcggccgcaggggctcaagggcggcggcatg
gcgggcatcaacctggccgccgacgcgcacgcgatgttcttcgccgcggttcgcaccgac
gatagcgagcacggcgagccgatggtggtcacctcgaccggccagagcgtcaaggtcacc
ccgttcgagctgtacccggcgaagggccgggccaccggcggcgtccggtcccaccggttc
ctcaagggcgaagccgggctggccctggcctgggtcgggccgcgtccggcgggatcgagc
cgcaccgggtcggcggtggaactgccggaatccgacccgcgccgcgacggttctgggcac
gcgcacccggggccggatgtcgtgggccatttgattgagcgggactga
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