Alloactinosynnema sp. L-07: CRK59916
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Entry
CRK59916 CDS
T04489
Name
(GenBank) ATP-dependent DNA helicase UvrD/PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
alo
Alloactinosynnema sp. L-07
Pathway
alo03420
Nucleotide excision repair
alo03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
alo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CRK59916
03430 Mismatch repair
CRK59916
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
alo03400
]
CRK59916
Enzymes [BR:
alo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CRK59916
DNA repair and recombination proteins [BR:
alo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CRK59916
MMR (mismatch excision repair)
Other MMR factors
CRK59916
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_30
DEAD
AAA_16
Motif
Other DBs
NCBI-ProteinID:
CRK59916
UniProt:
A0A0H5CPT1
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All DBs
Position
I:complement(5108770..5111157)
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AA seq
795 aa
AA seq
DB search
MGSARFSSSSAPGTVVRTMEALFDLPAEVPAAAPRRRSAALLDDLNDQQRRAVEHIGSPL
LVVAGAGSGKTRVLTRRVAYLLGERNVHPGQVMAITFTNKAAAEMKERVADLVGRRANAM
WVSTFHSMCVRVLRREAKTLGMTSSFSIYDADDSRRLITLVARDIDLDPKRYPARTLSIH
ISNLKNELIGPEKAATMAANDLERRVAEVYTEYQRRLGQANAMDFDDLIMRTVELLQGFP
DVAEHYHRRFRHVLVDEYQDTNHAQYTLVRELVGRGTDGLPPAELCVVGDADQSIYAFRG
ATIRNIVEFERDYPNATTVLLEQNYRSTQTILNAANAVISRNPDRRDKRLWTAMGDGEKI
VAYVGDNEHDEASFVAQEIDRLVDAGIAHNGDVAVFYRTNNQSRVFEEIFIRLGLPYKVV
GGVRFYERREVRDALAYLRVLANPEDTVSLRRILNVPRRGIGDRAEACVSTHADRERISF
SAALNDAAVGKVALLNPRSQRAIAGFVELIDGLRRFVDDGQDVAEILDAVLDQTGYRAEL
EASDDPQDASRLENLTELVTVAREFTEGPADIPPPETTAGPEPGSLDAFLERVSLVADAD
QVPDPDDESGGMVTLMTLHTAKGLEYPVVFSTGWEDGIFPHMRALSDPVELAEERRLAYV
GITRARERLYLSRAIVRSAWGQPMTNPASRFFDEIPPDLVDWRRMGPDRSSPTRATTWGS
RAARGGTARPAPSRGWQDTPALTLDVGDRVNHDKYGLGTVVATDGNGPRATATIDFGTAG
TIRLMLIGSVPLVKL
NT seq
2388 nt
NT seq
+upstream
nt +downstream
nt
gtgggatcggcgcggttttcgtcttcgtcggcccccggtaccgttgttcgcacgatggaa
gcccttttcgatctccccgccgaagtcccagccgccgcgccgcgccgtcggtccgccgcg
ctgctcgacgacctcaacgaccagcagcgccgcgccgtggagcacatcggcagcccgctg
ctcgtggtcgcgggcgcgggctcgggcaagaccagggtcctgacgcgccgcgtcgcctat
ctgcttggcgagcgcaacgtgcacccgggccaggtcatggcgatcaccttcaccaacaag
gccgccgccgagatgaaggagcgcgtcgccgacctcgttggccgccgggccaacgcgatg
tgggtgtcgaccttccactcgatgtgcgtgcgcgtgctgcgccgcgaggccaagacgctg
gggatgacgtcgagcttctccatctacgacgccgacgattcgcgcaggctgatcacgctc
gtcgcccgcgatatcgacctcgatcccaagcgctaccccgcgcgcacgctgtcgatccac
atctccaacctcaagaacgagctgatcggccccgagaaggccgcgacgatggcggccaac
gacctcgagcgccgcgtcgccgaggtctacaccgagtaccagcgcaggctcggccaggcc
aacgcgatggacttcgacgacctgatcatgcgcacggttgagctcctgcaaggcttcccg
gacgtcgccgagcactaccaccgccgcttccggcacgtgctggtcgacgaataccaggac
accaaccacgcgcaatacacgttggtgcgtgagctggtcggccgcggcaccgacggcctg
ccccccgccgagctgtgcgtggtgggcgacgccgaccagtcgatctatgccttccgcggc
gcgaccatccgcaacatcgtcgagttcgagcgcgactatccgaacgcgacaaccgttctg
ctggaacagaactaccgctccacgcagaccatcctcaacgccgccaacgcggtgatctcc
cgcaacccggaccgccgcgacaagcgcctgtggaccgccatgggcgacggcgagaagatc
gtcgcgtacgtcggcgacaacgagcacgacgaggcgtcgttcgtcgcccaggagatcgac
cggctggtcgacgcgggcatcgcgcacaacggcgacgtcgcggtcttctaccgcaccaac
aaccagtcccgggtgttcgaggagatcttcatccgcctcggcctgccgtacaaggtcgtc
ggcggcgtgcgcttctacgagcgccgcgaagtccgggatgccttggcgtacttgagagtc
ctggccaacccggaggacacggtcagcctccggcgtatcctgaacgtcccccgccgcggc
atcggcgaccgcgccgaggcctgcgtgtcgacgcacgcggaccgcgagcgcatctccttc
tccgccgcgctgaacgacgccgccgtcggcaaggtcgcgctgctgaacccgcgctcccag
cgcgccatcgcgggcttcgtcgagctgatcgacggcctgcgccgcttcgtcgacgacggc
caggacgtcgccgagatcctcgacgccgtgctcgaccagaccggctaccgcgccgaactg
gaggccagcgacgacccgcaggacgcctcccggctggagaacctgaccgagctggtgaca
gtcgcccgcgagttcaccgagggccccgccgacatcccgcccccggagaccaccgcgggc
ccggaaccgggctccctcgacgccttcctcgaacgcgtctcgctggtcgccgacgccgac
caggtccccgacccggacgacgagtccggcggcatggtcaccctgatgaccctgcacacg
gccaagggcctggaatacccggtcgtgttctccacgggctgggaagacggcatcttccct
cacatgcgcgcgctgagcgacccggtcgagctggccgaggaacgccgcctcgcctacgtc
ggcatcacccgagcccgcgaacgcctctacctgtcgcgcgcgatcgtccgctcggcctgg
ggccagccgatgaccaacccggcctcccgcttcttcgacgagatcccccccgacctcgtc
gactggcgccggatggggccggaccgctccagcccgacccgggctacgacgtggggatcc
cgtgcggctcggggcggcaccgcccgtccggcaccgtcgcgtgggtggcaggacacgccc
gcgttgacgctggatgtgggggaccgggtcaaccacgacaagtacggactggggacggtg
gtcgccacggacggcaacggtccccgggcgacggcgacgatcgacttcggcacggcgggc
acgatccggctgatgctcatcggcagcgtgccgctggtgaagctgtag
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