Alloactinosynnema sp. L-07: CRK59952
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Entry
CRK59952 CDS
T04489
Name
(GenBank) Heat shock protein 60 family chaperone GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
alo
Alloactinosynnema sp. L-07
Pathway
alo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
alo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CRK59952
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
alo03019
]
CRK59952
03110 Chaperones and folding catalysts [BR:
alo03110
]
CRK59952
03029 Mitochondrial biogenesis [BR:
alo03029
]
CRK59952
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
alo04147
]
CRK59952
Enzymes [BR:
alo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
CRK59952
Messenger RNA biogenesis [BR:
alo03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
CRK59952
Chaperones and folding catalysts [BR:
alo03110
]
Heat shock proteins
HSP60 / Chaperonin
CRK59952
Mitochondrial biogenesis [BR:
alo03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
CRK59952
Exosome [BR:
alo04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
CRK59952
Exosomal proteins of other body fluids (saliva and urine)
CRK59952
Exosomal proteins of breast cancer cells
CRK59952
Exosomal proteins of colorectal cancer cells
CRK59952
Exosomal proteins of bladder cancer cells
CRK59952
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
CRK59952
UniProt:
A0A0H5CPE4
LinkDB
All DBs
Position
I:complement(5147036..5148667)
Genome browser
AA seq
543 aa
AA seq
DB search
MPKQISFDEDARRALERGVNKLADAVKVTLGPRGRHVVLAKKFGGPTVTNDGVTIAREIE
LEDSFENLGAQLAKNVATKTNDVAGDGTTTATVLAQALVRVGLRNVAAGANPTSIGRGIQ
AASDAVVASLLAKATPVKGRDNIAQVGTVASRDASIGALLGEAIEKVGEDGVITVEESST
LATELVITEGVQFDKGFVSAHFATDPEAQEAVLEDTYVLLHRDKISALADLLPILEKVAE
SGKSVLIIAEDVEGEALSTLVVNALRKTIKAVAVKAPFFGDRRKAFLDDLAVVTGGQVIA
AEVGLKLSEATLDSLGTARRVVVSKDETTLVEGGGDKADIAGRAEQLRKEIEATESDWDR
EKLQERLAKLSGGVAVIKVGAPTETELSERKHRIEDAVAATKAAVEEGIVPGGGSALVQV
AKELDGNLGLTGDEATGVAIVREALSAPLFWIATNGGQEGAVVVNKVAELSWGHGFNAAK
LTYGDLLADGVVDPVKVTRSAVANAASIARMILTTESAVVDKKADAPDAGHGHGHGHGHG
HGH
NT seq
1632 nt
NT seq
+upstream
nt +downstream
nt
atgcccaagcagatcagtttcgacgaggacgctcgtcgggcccttgagcgcggggtgaac
aagctcgccgacgcggtcaaggtcactctcggcccgcgcgggcggcacgtcgtgctcgcc
aagaagttcggtggtccgaccgtcaccaacgacggtgtgaccatcgctcgtgagatcgag
ctcgaggactcgttcgagaacctcggtgcgcagctcgccaagaatgtcgccaccaagacg
aacgatgtcgcgggcgacggcaccaccaccgcgaccgtgctggctcaggcgctggtgcgc
gtcggcctgcgcaacgtcgccgccggtgcgaacccgaccagcatcgggcggggcatccag
gccgcatcggacgctgtggtcgcttcgctgctggcgaaggcgaccccggtcaaggggcgc
gacaacatcgcccaggtcggcaccgtcgcctcccgcgacgcgtcgatcggcgcgctgctc
ggtgaggccatcgagaaggtcggcgaggacggtgtgatcaccgtggaggagtcctccacg
ctggccaccgagctcgtcatcaccgaaggtgtgcagttcgacaagggcttcgtctcggcc
cacttcgccaccgacccggaggcgcaggaggccgtgctggaggacacctacgtcctgctg
caccgcgacaagatctccgcgctggccgatctgctgccgatcctggagaaggtcgccgag
tccggcaagtccgtcctgatcatcgccgaggacgtcgagggtgaggcgctgtcgacgctg
gtcgtcaacgccctgcgcaagacgatcaaggccgtcgcggtcaaggcgccgttcttcggc
gaccgccgcaaggcgttcctcgacgacctcgccgtcgtcaccggcggccaggtcatcgcc
gccgaggtcggtctcaagctgtccgaggcgaccctcgactcgctgggcaccgcccgccgc
gtcgtggtcagcaaggacgagaccacgctggtcgagggtggcggcgacaaggccgacatc
gccgggcgcgccgagcagctgcgcaaggagatcgaggccaccgagtccgactgggaccgc
gagaagctgcaggagcggctggccaagctgtccggcggcgtcgcggtgatcaaggtcggc
gcgccgaccgagaccgagctgtcggagcgcaagcaccgcatcgaggacgcggtcgcggcc
accaaggccgccgtcgaggagggcatcgtgcccggcggcggttcggcgctggtccaggtc
gccaaggagctcgatggcaacctcggcctcaccggcgacgaggccaccggtgtcgcgatc
gtgcgcgaggcgctgtccgcgccgctgttctggatcgccacgaacggcggccaggaaggc
gcggtcgtggtcaacaaggtcgccgagctgtcgtggggccacggcttcaacgccgcgaag
ctcacctacggcgacctgctcgccgacggcgtcgtcgacccggtcaaggtcacccggtcc
gcggtggccaacgccgcctcgatcgccaggatgatcctgaccaccgagagcgccgtggtg
gacaagaaggcagacgcgcccgacgccggtcatggccacggccacggccatggtcacggg
cacggccactga
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