Alloactinosynnema sp. L-07: CRK59999
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Entry
CRK59999 CDS
T04489
Name
(GenBank) DNA-directed RNA polymerase alpha subunit
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
alo
Alloactinosynnema sp. L-07
Pathway
alo03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
alo00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
CRK59999
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
alo03021
]
CRK59999
03400 DNA repair and recombination proteins [BR:
alo03400
]
CRK59999
Enzymes [BR:
alo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
CRK59999
Transcription machinery [BR:
alo03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
CRK59999
DNA repair and recombination proteins [BR:
alo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
CRK59999
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_5
SAM_EPH
Motif
Other DBs
NCBI-ProteinID:
CRK59999
UniProt:
A0A0H5CQG3
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All DBs
Position
I:complement(5195241..5196290)
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AA seq
349 aa
AA seq
DB search
MLISQRPSLGEEPVNETRSRFVIEPLEPGFGYTLGNSIRRTLLSSIPGASVTSIRIDGVL
HEFTTVPGVKEDVTDVILNLKELVVSSEEDEPVTMYLRKQGPGEVTAGDIVPPAGVTVHN
PDLHIATLNGKGKLEIELVVERGRGYVPAVQNKQAGAEIGRIPVDSIYSPVLKVTYKVEA
TRVEQRTDFDKLVLDVETKPSITPRDAVASAGKTLVELFGLARELNVDAEGIEIGPSPQE
ADTIAAYAMPIEDLDLTVRSYNCLKREGIHTVGELVSRSEADLLDIRNFGAKSIDEVKMK
LVGLGLALKDSPPGFDPTAAAADYASDGWSDSADTGNDDGQDYAETEQL
NT seq
1050 nt
NT seq
+upstream
nt +downstream
nt
gtgctcatctcacagcgacccagcctgggtgaggagccggtcaacgagacccgctcccgt
ttcgtcatcgagcccctcgagcccggcttcggctacacgctcggcaactcgatccggcgc
acgctgctgtcctcgatccccggcgcctcggtgaccagcatccgcatcgacggtgtgctg
cacgagttcaccactgtgccgggtgtcaaggaggacgtcaccgacgtcatcctcaacctc
aaggagcttgtcgtctcctctgaggaggatgagccggtgacgatgtacctgcgcaagcag
ggccccggtgaggtcaccgcgggggacatcgtgccccccgccggtgtcacggtgcacaac
cccgacctgcacatcgccaccctgaacggcaagggcaagctggagatcgagctcgtcgtc
gagcgcggtcgcggctatgtcccggcagtgcagaacaagcaggcgggcgcggagatcggc
cggatcccggtcgactcgatctactcgccggtcctcaaggtgacctacaaggtcgaggcc
acccgtgtcgagcagcggaccgacttcgacaagctggtcctcgacgtcgagaccaagccg
tcgatcaccccgcgcgacgccgtggcgtccgcgggcaagacgctggtcgagctgttcgga
ctcgcccgcgagctgaacgtcgacgccgagggcatcgagatcggcccctcgccgcaggag
gcggacaccatcgccgcctacgcgatgccgatcgaggacctcgacctcaccgtgcgctcc
tacaactgcctcaagcgcgagggcatccacaccgtgggtgaactggtttcgcgcagcgag
gcggacctgctggacatccgcaacttcggtgcgaagtcgatcgacgaggtcaagatgaag
ctcgtcggcctcggtctcgcgctcaaggacagcccgcccgggttcgacccgacggctgcc
gcggcggactacgcctccgacggctggtcggacagcgcggacaccggcaatgacgacggc
caggactacgcagagacggagcagctctga
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