Alloactinosynnema sp. L-07: CRK60113
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Entry
CRK60113 CDS
T04489
Name
(GenBank) Outer membrane protein
KO
K03286
OmpA-OmpF porin, OOP family
Organism
alo
Alloactinosynnema sp. L-07
Brite
KEGG Orthology (KO) [BR:
alo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
alo02000
]
CRK60113
Transporters [BR:
alo02000
]
Other transporters
Pores ion channels [TC:
1
]
CRK60113
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Paralog
Gene cluster
GFIT
Motif
Pfam:
OmpA
BON
BON_like
Yop-YscD_ppl_1st
Motif
Other DBs
NCBI-ProteinID:
CRK60113
LinkDB
All DBs
Position
I:complement(5287239..5288411)
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AA seq
390 aa
AA seq
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MPSSVAESLKPGETLVRRTETTTYERRGGWLPWLLGLLLIPALLALLASFTSWGERDAVQ
DDLGAKSLAALSAAGIPGAKVNMDGVVANVSDVPADKVDAARAAVEDVSGVWSANVTGSG
GSGSGATPPAPASANPSASVVPPAASSGPLGFELKNGQVVLTGNVPDEAARQALVAAATQ
VAGGRPVVNNLAVAPGATLPAAPADLAKAVVLLGTAPGDRGVKWDGNTITLTGSVPTEAD
KAAATQAVAAAAPGVKFDNQLTVAAPAPAPAVDKAALQKQINDLLAAQGITFQPNSSTLT
GPGAATLQKIAPLLAGKDVSLEVSGHIADVANSLDGQQLSEQRAAAVKAQLAQLGVPADK
MTAKGFGASKPLPGNAPSAPANRRVEITVI
NT seq
1173 nt
NT seq
+upstream
nt +downstream
nt
atgccaagttccgtagcagaatcgctcaagcccggtgagaccctggtccgccggactgag
acgaccacatatgaacgtcgcggcggctggctgccatggcttctcggcttgttgctgatc
ccggcgctgctcgcgctgctggccagcttcacatcgtggggtgaacgcgacgccgtccaa
gacgatctcggcgcgaaatcgctggccgcgctgagcgccgcgggcatccctggggccaag
gtcaacatggacggtgtcgtcgccaacgtctccgacgtgcccgccgacaaggtcgacgcc
gcccgcgcggcggtcgaggacgtcagcggcgtctggtcggccaacgtcaccgggtccggc
ggctccggttccggcgccacaccacccgcgcccgcgagcgccaacccgtcggccagtgtc
gtgcccccggccgcgagttctggcccgctcggcttcgaactcaagaacggccaggtcgtc
ctcaccggcaacgtcccggatgaggccgcccggcaggcgctggtcgccgcggccacccag
gtcgctggtggccgcccggtcgtcaacaatctcgcagtcgcccccggagccacgctcccg
gccgccccggccgacctggccaaggccgtcgtcctactgggcaccgcgcccggcgaccgc
ggcgtcaagtgggacggaaacacgatcacgttgaccggctcggtgccgaccgaggccgac
aaggccgccgccacgcaggccgtggccgcagccgcccctggcgtgaagttcgacaaccag
ctgaccgtcgccgccccggcgcccgcgcccgcggtcgacaaagccgcgctgcagaagcag
atcaacgacctgctcgcggcccagggcatcacgttccagcccaactcgagcacactcacc
ggccccggcgccgcgacgctgcagaagatcgcgccgctgctggcgggcaaggacgtctcg
ctggaggtctccggccacatcgccgacgtcgccaacagcctcgacggccagcagctcagc
gagcagcgcgcggcggcggtcaaggctcagctcgcccagctcggggtgcccgccgacaag
atgaccgccaagggcttcggcgcgagcaaaccgttgccgggcaacgcccccagcgcgccc
gccaaccgccgcgtcgagatcactgttatctag
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