Alloactinosynnema sp. L-07: CRK60378
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Entry
CRK60378 CDS
T04489
Name
(GenBank) probable helicase
Organism
alo
Alloactinosynnema sp. L-07
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Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
SNF2_assoc
Motif
Other DBs
NCBI-ProteinID:
CRK60378
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Position
I:5543297..5546338
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AA seq
1013 aa
AA seq
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MVAVVLTASGLDQRGSTVVRTPPPPTWEQSLSSLVGPGGASARSDGAAIAIEITVAAAPG
RPTRRGMPVEPTLKVVARLVTPGRNGWVAGGLSWTKLANPYQCTEYRTSHVRLLRELHAV
YRSHENSYSYGYHAEQKTIDLATFESRQLWTLLDEAEAIGVAMVHGRKKVGPLASYTRAR
VLLDVTRAAESDSLSIAPVLRIEGPEADAAPLTFIGSDGHGVVYVDRAQIRAGTDHGDWR
LRLARLDGTVPAQLQRMAVDNQHLVVPAGQGDRFRNEFYPRLRHIAPVVSTDGSFTPPAI
SDPTLVLRANYGANHALDLNWEWAYQIGDSPLRIPLGQAGSDDGYRDLAKERSVLADLGL
PLEEFGLRDEEHALAPGARLRGIDTLRFTTEVIPLLTGATGTAVEVGGDPVDYREAGDTL
RIGVSTGEVAGETDWFDLGVTITVEGRQVPFAEVFKALDADESHLLMPDGAYFSLHKPEL
QALRKLIEEARALRDSPDGPLKISRFQVGLWDELAELGVVEKQAAAWQRQLDALRSVDSV
DAIQPPDTLAAQLRGYQLDGYRWLRFLWDFQLGGVLADDMGLGKTVQTLALICHAKQADP
DRAPFLVVAPTSVVSNWAAEIARFAPGLTVVCITDTMRKRGQTLAETVAGADVVVTSYTL
FRIDYDNYAESTWSGLILDEAQFTKNHQSKIYQCARRLPAPFKLAITGTPMENNLMELWS
LLSITSPGLFPNPTRFRDYYGQPIEKRGDTELLAQLRRRIKPLVRRRTKEQVAADLPAKQ
EQVLEVELHPKHRKIYQTHLQRERRKVLGLVDDMNKNRFTILSSLTLLRQLSLHPGLVDD
GSHDLASAKIDVLLEHLHEVVDGGHRALVFSQFTGFLDKVRGGLDAAGIDYCYLDGKTRD
RATVLKRFKDGSAPVFLISLKAGGFGLNLTEADYCFLLDPWWNPATEAQAVDRTHRIGQT
RNVMVYRLIAKDTIEEKVMALKARKAELFTSVMDDGNMFGSGLDVADIRELFA
NT seq
3042 nt
NT seq
+upstream
nt +downstream
nt
gtggtcgccgtggtcctgacagcgtccgggttggaccagcgcgggtcgacagtcgtgcgg
accccgccgccgccgacctgggagcaatcgctcagttccttggtcggccccggaggcgcc
tcggcgagatccgacggggcggcgatcgccatcgagatcactgtggccgcagcgccgggc
cgaccgacccggcgcggtatgcctgtcgagccgacgctgaaggtcgtcgcgcggctggtc
acaccagggcgcaacggttgggtcgcgggcgggctctcctggaccaagctggccaacccc
tatcagtgcaccgaataccgcacctcccatgtgcggctgcttcgggaactgcacgcggtg
taccggtcccacgagaattcgtactcctacggctaccacgccgaacagaagacgatcgac
ctggcgaccttcgagtcgcgccagctgtggactttgctggacgaggcggaggccatcggc
gtggcgatggtgcacgggcgcaagaaggtgggcccgctggcgtcctacacccgtgcacgg
gtgctgctggatgtcacgcgggcagcggaatccgattcgctgtcgatcgcgcccgtactg
cggatcgaagggcccgaggcggatgccgcgccgctgacgttcatcgggtccgacggccac
ggcgtggtgtatgtcgatcgcgcgcagatccgggccgggaccgaccatggcgattggcgg
cttcgactggccaggctcgacgggaccgtgcccgcccagttgcagcggatggcggtggac
aaccagcacctcgtcgttccggcggggcaaggcgaccggttccggaacgagttctatccc
cggcttcggcacatcgcgccagtggtctccacggatggctcgttcaccccgcccgcgatc
tccgacccaaccctggtgctgcgcgcgaactacggcgcgaaccacgccctcgacctgaat
tgggaatgggcgtaccagatcggcgattcgccgctgcggataccgctcggtcaagcgggc
tccgatgacggataccgcgacctggccaaggaacgatcggttctggccgacctcggactt
cccctggaggaattcggcctgcgcgacgaggagcacgccttggctccgggcgcgcggctg
cgcgggatcgacacgttgcgcttcaccaccgaggtgatcccgctgctgacgggcgcgacc
ggcaccgctgtggaagtcggcggagatccggtcgactaccgggaggcgggtgacacgctg
cgaatcggcgtgtcgaccggggaggtggcgggcgagacggactggttcgacctcggcgtc
accatcaccgtcgaggggcgccaggtccccttcgccgaggtgttcaaggcgctggacgcc
gacgaatcgcatctgctgatgccggacggcgcgtatttctccttgcacaagcccgagttg
caggctctgcgcaagctgatcgaggaggcacgcgcactgcgcgactcgccggacggcccg
ctcaagatcagccgattccaggtcggcctctgggacgagctagccgagttgggcgtggtc
gagaagcaagcagccgcgtggcagcggcagctcgacgccctgcggtcggtcgactcggtc
gacgcgatccagccaccggacaccctcgccgcccagttgcgcggctaccagctcgacggc
taccgctggctgcgtttcctctgggacttccagctcggcggcgtcctcgccgacgacatg
ggcctgggcaagacggtgcagaccctcgccctgatctgccacgcgaagcaagccgatcca
gaccgtgcgccgttcctcgtcgtcgcgccgaccagcgtcgtgtcgaactgggcagcggag
atcgcgcggttcgcacctggcctgacggtcgtgtgcatcaccgacacgatgcgcaagcgc
ggccagaccctcgccgaaaccgtggcgggcgccgacgtggtggtcacctcctacaccctg
ttccgcatcgactacgacaactacgccgagtcgacctggtccgggctgatcctggacgaa
gcccagttcaccaagaaccaccagtccaagatctatcagtgcgcccgcaggcttcccgcg
ccgttcaagctcgcgatcaccggaacccccatggagaacaacctgatggagttgtggtcg
ctgctgtcgatcacctcacccgggttgttcccgaacccgaccaggttccgcgactactac
ggccagccgatcgagaagcggggcgacacggagctcctcgcgcaactgcgtcgacggatc
aagccgctggtgcggcgccgcaccaaggagcaggtggccgccgacctgcccgcgaagcag
gagcaggtgctcgaggtcgagctgcacccgaaacaccgcaagatctaccagacgcacctg
caacgcgagcgcagaaaggtactcggcctggtcgacgacatgaacaagaaccggttcacg
atcctgagctcgctcacattgcttcgccaactgagcctgcaccccggacttgtcgacgac
ggcagccatgacctggcttccgccaagatcgacgtgctgctcgaacacctgcatgaggtc
gtggacgggggccaccgggcgctggtgttcagccagttcaccgggttcctcgacaaggtg
cgcggcggcctcgacgccgccgggatcgactactgctacctcgacggcaagacccgcgac
cgcgccacggtgttgaaacggttcaaggacggatcggccccggtgttcctgatcagcctc
aaggcaggcgggttcggcctgaatctgaccgaggccgactactgcttcctgctggacccg
tggtggaacccggcgacggaggcgcaggctgtggaccggacccaccgcatcggacagacc
cgcaacgtcatggtgtaccggctcatcgccaaggacaccatcgaggaaaaggtgatggcg
ctaaaggcccgcaaggccgagctgttcaccagcgtcatggacgacggcaacatgttcggg
tcgggtctggacgtcgccgacatccgagaactcttcgcctga
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