Alloactinosynnema sp. L-07: CRK60439
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Entry
CRK60439 CDS
T04489
Name
(GenBank) Sensory box/GGDEF family protein
Organism
alo
Alloactinosynnema sp. L-07
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EAL
GGDEF
PAS
PAS_4
PAS_9
PAS_3
PAS_8
Motif
Other DBs
NCBI-ProteinID:
CRK60439
UniProt:
A0A0H5CRJ9
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Position
I:complement(5595144..5597237)
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AA seq
697 aa
AA seq
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MDCAPGEREAFAEQWATALAASGYVAMDRRTLVENVGKYAEILLAALAAEQFDPGPVARI
GGTLVELGLTYPQTLSASIQLIGDGLPRLAGRANTGRIPAVQAAFAAGFATAMRQKIFHD
QEEIRRAAFDARRGAENALLASEARFRAMFTQSAVGIGIADRYGTLTEVNAACARMFGYD
VKDMAGLHIDQLRFPDEPAAMRAPLKEMLAGERDSYRMERMLRKVDGTPLWTDLSVTLVR
DGDGAPNFVVGMVEDITDRHTLEQRLRHQANHDPLTGLGNRALFTERLNAAFALGGEHRV
GLCYLDLDGFKVINDSLGHDIGDQLLIAVAARLDRMVSGADRMVSRMGGDEFVVLVEHCA
GVDQMVDLAERILTALSEPVRIGGHRLTVSASIGLVDRAVTTATPAETMRDADVTLYWAK
GDGKNRWAVYDSERNAREVARFTLAARMPAAVESDEFYVDYQPIVRLSDGRLVGVEALVR
WAHPEFGRLGPDQFIGLAEETGLIVPLGRWVLREATRQARRWRDAYGDRAPWMSVNLAAR
QTEEPTLVADVTTILRAARLPPSSVQLELTESAIMGSAGASLKALRELADLGVRIAIDDF
GTGYSNLAYLRHLPVHAIKLAGTFMEGLRDTPDADPADARIVATLVELAHALGHNVVAEG
VEDPEQAERLRAIGCDSAQGWLFAKPGPPEEIERWLT
NT seq
2094 nt
NT seq
+upstream
nt +downstream
nt
gtggactgcgcaccgggcgagcgggaggcgttcgcggagcagtgggcgacggccctggcc
gcctcgggctatgtcgcgatggaccgtcgaaccctggtggagaacgtcggcaagtacgcc
gagatcctgctggccgccctcgccgccgagcagttcgatcccgggcccgtcgcccgcatc
ggcgggaccctcgtcgaactcggcctgacctacccgcagaccctctccgcctcgatccag
ctcatcggcgacggcctgcccaggctcgccgggcgcgcgaacacgggccggatcccggcc
gtgcaggccgccttcgccgcgggcttcgccaccgccatgcgccagaagatcttccacgac
caggaggagatccgccgggccgccttcgacgcccgccgcggcgccgagaacgcgctgctg
gccagtgaggcgcggtttcgcgcgatgttcacccagagcgccgttggcatcggaatcgcc
gaccggtacggcacgctgaccgaggtcaacgcggcgtgcgcgcgcatgttcggctacgac
gtgaaagacatggcaggtctgcacatcgaccaactgcggttccccgacgaaccggcggcg
atgcgggccccgctcaaggagatgctggccggggagcgcgacagctaccggatggaacgg
atgctgcgcaaggtcgacggaactccactatggacagacctgtcggtcacgctggtgcgc
gacggcgacggggccccgaacttcgtcgtcggcatggtcgaggacatcaccgaccgccac
accctggaacagcgcctgcgccatcaggccaaccacgatccgctgaccggattgggaaac
cgcgcgctgttcaccgagcggctcaacgccgccttcgcgctcggcggtgaacaccgggtc
ggcctgtgctacctcgacctcgacgggttcaaggtcatcaacgacagtcttggccacgac
atcggcgaccaactgctcatcgcggtcgccgcccggctcgaccggatggtgtcgggggcc
gaccggatggtgtccaggatgggcggcgacgagttcgtggtcctggtcgagcactgcgcg
ggcgtcgaccagatggtcgacctggccgagcggatcctgaccgcactgtccgagccggtg
cgcatcggcggccaccggctgacggtgtcggcgagcatcggcctggtcgaccgcgccgtc
accaccgcgacccccgccgagacgatgcgcgacgccgacgtcacgctctactgggccaag
ggtgacggcaagaaccgttgggccgtctacgattccgagcgcaacgcccgcgaggtcgcc
cgcttcaccctggccgcgcggatgcccgcggcggtcgagagcgatgagttctatgtggac
tatcagccgatcgtgcggctgtccgacggcaggctcgtcggcgtcgaggcgctggtgcgc
tgggcccaccccgagttcggcaggctcgggcccgaccagttcattgggctggcggaggag
accgggctgatcgtcccgctgggccggtgggtgctgcgggaggccacccggcaggcccgc
cgctggcgcgacgcctacggcgaccgggcgccgtggatgagcgtcaacctcgccgcccgc
cagaccgaggaacccaccctcgtcgccgacgtcaccaccatcctgcgcgccgcccggctg
cccccatcgagtgtccaattggaactgaccgagtccgccatcatgggcagcgcgggcgcc
tccctcaaggcgctgcgggaactggccgacctcggcgtccgcatcgcgatcgacgacttc
ggcaccggctactcgaacctggcctacctgcggcacctgccggtgcacgcgatcaagctc
gctggaaccttcatggagggcctgcgcgacacccccgacgccgacccggccgacgcgcgg
atcgtggccacgctggtggaactggcgcatgccttggggcacaacgtggtcgccgagggc
gtggaggacccggagcaggcagagcggctgcgcgccatcggctgcgacagcgctcaaggc
tggctgttcgccaaacccggtcccccagaggagatcgagcgctggctcacctga
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