Alloactinosynnema sp. L-07: CRK60846
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Entry
CRK60846 CDS
T04489
Name
(GenBank) Transport ATP-binding protein CydCD
KO
K16014
ATP-binding cassette, subfamily C, bacterial CydCD
Organism
alo
Alloactinosynnema sp. L-07
Pathway
alo02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
alo00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
CRK60846
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
alo02000
]
CRK60846
Transporters [BR:
alo02000
]
ABC transporters, eukaryotic type
ABCC (CFTR/MRP) subfamily
ABCC-BAC subgroup
CRK60846
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_membrane
AAA_21
AAA_29
SMC_N
AAA_22
SbcC_Walker_B
AAA_16
nSTAND1
AAA_33
RsgA_GTPase
Dynamin_N
MMR_HSR1
DUF87
NACHT
AAA_23
AAA_25
FtsK_SpoIIIE
AAA_28
DLIC
ATP_bind_1
AAA_24
Motif
Other DBs
NCBI-ProteinID:
CRK60846
LinkDB
All DBs
Position
I:5980576..5983638
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AA seq
1020 aa
AA seq
DB search
MKALRILSPSARRALVLCGLLAVASACASVGQAWALAAAITGQAALGWLALAVIACGLLT
WATQVVAARAAAGAKAELRAVLLDRTLRAGPEWITARGPGELTALATRGLDALDAYFGTF
LPALVAAAVTPLGVGAVILFVDWPSAVVVAMTVPLIPLFAILIGRYTEDRVAGAAAANER
LSGHLLELVRVLPVLAAFGRARAQAEAVRRTSDAHRRGTLGVLRVAFTSALALELIATLS
VALVAVVIGLRLVSGDLSLVVGLFVLIVVPECYLPLRAAGAAHHAAADGMEAVRRVAEVP
LTPPAGGRAVSDFAELRIDDLSVRRRDGFAPDGVSLVVKPGEIVRLDSPSGSGKSTLLAV
LLGFVAPTSGDVLVDGVPLGELDVEAWRELVAWVPQRPTFAESVVADEVGDRALARDLAA
EHLLDRRIDDLSAGERQRVALLRALARPGVRLLLLDEPTAHLDPATAAQVMSVVRRVADS
GVAVVLATHRGVDPAVSTTDSASVVEVVAVAEGNVSPLRTLLTRRTLAGAALGAAAVVCG
IALTALSAWLIARAAQQPPILALSVAVVGVRTFGLARAGLRYVERLVTHDAAFRTATAAR
VRLWSALVARGPARLPRGDEGQRRLVDDVDQVRDLTPRVLVPPVIVFAVVAAAVAVQTAI
LPVAGLVLAAAVVVACVGGPAVTLVAERRATARLAEGRRGLAAQVLTLLDGAADLVAFGR
DKRLRTALTRVDARLTARARGQAYGAGAGSALITVALGLASAVSLGLAGGLPSVLVPVVA
LVPLALADAVLLLPPALSHLAPLRAAHRRTTLPVEPPRPIAVTADGGCGVTGDVRWGGAD
RPALRGVDLDLPAGARVAVVGPSGSGKSTLVAALLGFLEPERGHASRPPTVAWCPQDPML
IASTVRENLRLAAPEATDADLVAVLREVCLPDLLDAQAKTLSGGEAQRVSLARALLADAD
LLLLDEPTAHLDRATAERVLAVIHQVRGTVVHVTHFQAEADMADVVVEVADGRVRTRVAA
NT seq
3063 nt
NT seq
+upstream
nt +downstream
nt
atgaaggcactgcggatcctctcgccgtcggcgcggcgggccttggtcctctgtggactc
ctcgcggtcgcgtccgcctgcgcgtccgtcgggcaggcgtgggcgctcgccgcggccatc
accggccaggccgcgctgggctggctcgcgctcgcggtgatcgcctgcggcctgctcacc
tgggcgacccaggtcgtggccgcccgcgcggcggccggcgccaaggccgaactgcgcgcg
gtcctgctcgaccggacattgcgcgcgggcccggagtggatcaccgcgcgcggccccggc
gagctgaccgccctggccaccaggggtctcgacgcgctcgacgcctacttcggcacgttc
ctgcccgccttggtcgccgccgcggtgacgccgctgggggtcggcgcggtgatcttgttc
gtggactggccgtcggcggtagtcgtcgcgatgaccgtgccgctgatcccgctgttcgcc
atcctcatcggccgctacaccgaggaccgggtggcgggcgcggcggcggcgaacgagcgc
ctgtccgggcacctgctggagctggtccgagtgctgccggtgctcgccgcgttcggccgg
gcgcgtgcccaggccgaggcggtccggcgcacgtccgacgcacaccgccggggcacgctc
ggggtgttgagggtggcgttcacgtcggcgttggcgctggagttgatcgcgacgctgtcg
gtggcgctggtcgcggtggtgatcggcctgcggctggtgtcgggggacttgtcgctggtg
gtgggcctgttcgtgctgatcgtggtgcccgagtgctatctgccgctgcgcgcggcgggc
gcggcgcaccacgcggcggccgacgggatggaggccgtccggcgcgtggccgaggtgccg
ttgacaccgcccgctgggggtcgggcggtgtcggacttcgccgaactgcggatcgacgac
ctgagcgtgcgcaggcgggacgggttcgcgcccgacggggtgtcgctggtcgtcaaaccc
ggcgagatcgtgcggctggactcgccgagcggcagcggaaagtcgacgctgctggcggtc
ctgctcggcttcgtggcgccgacgtcaggggacgtcctggtggacggggtgccgctaggc
gaattggacgtcgaggcgtggcgggagttggtggcgtgggtgccgcagcggccgacgttc
gccgagtcggtggtggctgacgaggtcggggaccgcgcgctggctcgggacctcgccgcc
gagcacctgctcgaccggcggatcgatgacctgtcggcgggcgagcggcagcgggtcgcc
ctgctgcgggcgctggctcggccgggggtgcggctgctgctgctcgacgaacccaccgcg
cacctggacccagccaccgccgcccaggtgatgagcgtggtgcgccgggtggctgacagc
ggggtcgcggtcgtgctcgcgacccatcgcggggtcgacccggctgtgtcgaccaccgac
tccgcgtcagttgtggaggtcgtcgcggtggccgaggggaacgtttcaccgctgcggacg
ctgctgacccgccggacgctggcgggcgcggcgctgggggccgccgccgtggtgtgcggg
atcgccttgaccgcgctgtcggcctggctgatcgcgcgggcggcccagcagccgccgatc
ctggcgctgtcggtggccgtcgtcggggtgcggacgttcgggttggcgcgcgcggggctg
cgctacgtggagcggttggtcacccacgacgccgcgttccggaccgcgaccgcggctcgg
gtgcggctgtggtcggccctggtggcgcggggacccgcccggctgccgaggggggacgag
gggcagcggcggctggtcgacgacgtggaccaggtccgcgatctgacaccaagggtcctg
gtgccgcccgtgatcgtcttcgcggtcgtggcggcggcggtggcggtgcagacggcgatc
ctgccggtcgcgggtcttgtcttggcggccgcggtcgtcgtggcctgcgtgggtgggccc
gcggtgacactggtcgccgagcgtcgggccaccgcccggctggccgagggcaggcggggc
ctggccgcccaggtgctgaccctgctcgacggcgccgccgatctcgtggcgttcgggcgg
gacaagcgtttgcgcacagccctgaccagggtcgacgcgcgactcaccgcgcgggcccgt
ggacaggcttacggcgcgggcgcggggtcggcgctgatcacagtggcgctcgggctggcg
tccgcggtcagcttggggctcgcgggcggactgccctcggtgctggtgcccgtggtcgcc
ctcgtgccgctggcgttggcggacgccgtcctgctgctgccgcccgcactcagccacctc
gccccgctccgcgccgcgcatcgacggacgacactgcccgtggagcctccgcggccgatc
gcggtcacggcggacggcggctgtggagtcacgggtgacgtccggtggggcggggcggac
cggcccgccttgcgcggcgtcgacctcgaccttcccgcgggcgcaagagtcgccgtggtc
ggcccctccggctccgggaagtccactttggtcgccgccctgctcggcttcctcgaaccg
gagcgcggccacgcgagccgaccgccgacggtcgcctggtgcccgcaggacccgatgctc
atcgcgagcacggtccgggagaacctgcgcctggccgcccccgaggccaccgacgcggac
ctggtcgccgtgctgcgagaggtctgtcttcccgacctgctcgacgcccaggccaagacc
ctgtccggcggcgaggcccagcgcgtgtcactggccagggcgctgctcgccgacgcagac
ctgcttctgctcgacgagccgaccgcgcacctcgaccgggccaccgccgagcgcgtcctc
gcggtgatccaccaggtcaggggcaccgtcgtgcacgtcacccacttccaggcggaagcc
gacatggccgacgtggtggtcgaggtcgccgatggccgcgtccgtaccagggtggcggca
tag
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