Alloactinosynnema sp. L-07: CRK61896
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Entry
CRK61896 CDS
T04489
Name
(GenBank) ATP-dependent DNA helicase UvrD/PcrA, actinomycete paralog
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
alo
Alloactinosynnema sp. L-07
Pathway
alo03420
Nucleotide excision repair
alo03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
alo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CRK61896
03430 Mismatch repair
CRK61896
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
alo03400
]
CRK61896
Enzymes [BR:
alo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CRK61896
DNA repair and recombination proteins [BR:
alo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CRK61896
MMR (mismatch excision repair)
Other MMR factors
CRK61896
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
HRDC
UvrD_C_2
AAA_30
Motif
Other DBs
NCBI-ProteinID:
CRK61896
UniProt:
A0A0H5CUQ8
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All DBs
Position
I:7013822..7015894
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AA seq
690 aa
AA seq
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MAGAHDPLAGLDPEQLAAVTAPRGPVCVLAGAGTGKTRTIVSRIGNLIHAGHISASQVLA
VTFTARAAGEMRTRLRALDIHGAQARTFHAAALRQLRYFWPRVVGGEQWQLLDGKLRLVG
HASHRLGLGSERETLRDLAGEIEWAKASLVGPEDYPAAAARAHRETPAPAEQIAKVYAGY
EELKNRAQQLDFDDLLLHTAAALEEHSAVAEEFRDRYRCFVVDEYQDVTPLQQRVLDAWL
GRRDDLTVVGDANQTIYSFAGASPRPLLDFTRRFPEATVVRLERDYRSTPQVVSLANRVI
SAARDRPAGSRLRLIGQRPTGPEPRFVEFDDEPAEAAAVAGRIKDLIDAGVPLSEIAVLF
RINAQSEVYEAALAGLDIPYLVRGGERFFARQEVRQAMATLRTAAVQAPRGELPELVRAL
LGPLGLTAEPPAGGSARERWESLLALVELAEELTATVADADLPRYVHELDLRLQAQHPPT
VEGVTLATLHAAKGLEWDAVFLVGMVDGTLPIQHADGNDAAVEEERRLLYVGVTRARVHL
SLSWALARAEGGKRYRRRSRFLYGLIPDNHPAARVSAARRSDHRPMAVIRHCRVCGDELA
GTMAFKLGRCETCPADLDEGLLDRLREWRQERSKALKVPAYVIFTDATLLAIAEQRPADR
AALVAISGIGGAKLDRYGQEVLSLVAGATQ
NT seq
2073 nt
NT seq
+upstream
nt +downstream
nt
atggccggcgcacacgatccgctcgccgggctggacccggaacagctcgccgcggtgacg
gccccacgcggcccggtctgcgtcctcgcgggcgcgggcacgggcaagaccaggacgatc
gtcagccgcatcggcaacctcatccacgcgggccatatcagcgcgagccaggtcctggcc
gtcacgttcaccgcgcgcgcggcgggggagatgcggacgcggttgcgcgctctcgacatc
cacggcgcccaggcgcgcacgttccacgccgcggcgctgcggcagctgcggtacttctgg
ccgcgggtggtcggcggcgagcagtggcagctgctcgacggcaagctgcgcctcgtcggc
catgcgtcacaccggctcggcctgggcagcgaacgcgagaccctgcgcgacctggccggt
gagatcgagtgggccaaggcgtcgctggtcgggccggaggactacccggccgccgccgcg
cgcgcccaccgtgagacgcccgcgcccgccgagcagatagccaaggtctacgcgggctat
gaggaactgaagaaccgggcccagcagctcgacttcgacgatctcctgctgcacaccgcc
gccgcgctggaggaacactccgcggtggccgaggagttccgcgaccgctaccgctgcttc
gtcgtcgacgagtaccaggacgtcaccccgctgcagcagcgcgtcctcgacgcctggctc
ggcaggcgtgacgacctcaccgtcgtcggcgacgccaaccagaccatctattcgttcgcg
ggcgcctcgccgcgcccgctgctcgacttcaccaggcgcttccccgaggccactgtggtg
cggctcgaacgcgactaccggtcgaccccgcaggtggtgtcgctggccaaccgggtcatc
tcggcggcgcgcgaccggcctgcgggctcgcggctgcggctgatcggccagcgtccgacc
ggcccggagccgcggttcgtcgagttcgacgacgagcccgccgaggccgccgccgtcgcg
ggtcggatcaaggacctcatcgacgccggggtgccgctcagcgagatcgcggtgctgttc
cggataaacgcgcagtcggaggtctacgaggcggcgctggccgggctcgacatcccgtac
ctggtgcgcggcggcgagcggttcttcgcccgccaagaggtgcgccaggccatggcgacg
ctgcgcacggccgcggtccaggccccgcggggcgagttgcccgagctggtccgggccctg
ctcggcccgctcggcctgaccgccgagcccccggcgggcggctcggcgcgcgagcgctgg
gagtcgctgctcgcgctggtggagctggccgaggaactgaccgccaccgtcgccgacgcc
gacctgccccgctacgtgcacgagctcgacctgcggctgcaggcccagcacccgcccacg
gtcgagggtgtgaccctggcgacgctgcacgcggcgaaggggctggagtgggacgcggtg
ttcctggtcggcatggtcgacgggaccctgcccatccagcacgccgatggcaacgacgcc
gccgtcgaggaagaacgcaggctgctctatgtgggggtgacgcgcgcgcgggtgcacctg
tcgctgtcgtgggcgctggccagggccgagggcggcaagcgctaccgcaggcgcagccgg
ttcctctatgggctgatccccgacaaccacccggccgccagggtgagcgccgcgcgccga
agcgaccatcggccgatggcggtcatccggcactgccgcgtctgcggcgacgagttggcc
gggacgatggcgttcaagctgggccgttgcgagacgtgtcctgccgatctcgacgagggc
ctgctggatcggctgcgcgagtggcgccaggagcggtccaaggcactcaaagtgcccgcg
tacgtgatcttcaccgatgcgaccctgctggcgatcgccgaacagcgtccggccgatcgg
gccgcgctcgtggcaatctccggcatcgggggcgccaagctggacagatacggccaagag
gtgctgtccctggtggctggagccacccagtag
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