KEGG   Aerococcus loyolae: CJ190_002210
Entry
CJ190_002210      CDS       T09408                                 
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
  KO
K03702  excinuclease ABC subunit B
Organism
aloy  Aerococcus loyolae
Pathway
aloy03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:aloy00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    CJ190_002210 (uvrB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:aloy03400]
    CJ190_002210 (uvrB)
DNA repair and recombination proteins [BR:aloy03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     CJ190_002210 (uvrB)
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      CJ190_002210 (uvrB)
SSDB
Motif
Pfam: UvrB_inter UvrB_3rd UvrB Helicase_C ResIII UVR DEAD AAA_30 AAA_19 UB2H UvrD-helicase AAA_7 AAA AAA_22 Peripla_BP_6
Other DBs
NCBI-ProteinID: WIK92937
LinkDB
Position
496598..498592
AA seq 664 aa
MDGKFELVSSYQPSGDQPQAIKKLVEGVENNDKAQVLLGGTGTGKTFTMANVIAETNRPT
LVLAHNKTLAGQLYSELKEFFPHNAVEYFVSYYDYYQPEAYVPSSDSYIEKSASVNDEID
KLRHSATSSILERRDTIIVASVSCIYGLVDPMEYKNHVLSIRQGQEVDRNDFMRRLVDMQ
YERNDIEFRRGTFRVRGDVVEVFLPSRDSEAIRVEFFGDEIDRIRQVDVLTGEVKNDVKH
YPIYPATHFVVDYNKMQRAVDSIEAELEVQLKKFNDQGKLLEAQRLEQRTRYDIEMLLEM
GYCNGIENYSRHMDGRAPGQPPYTLLDFFPDDYLLMVDESHMTMPQVRGMYNGDKARKEQ
LVDYGFRLPSALDNRPLKLAEFEERVNQAIYVSATPGDYEIEKANGEVVEQIIRPTGLLD
PKVEVRPIKGQIDDLISEINERVDRGDRVFVTTLTKKMSEDLTDYLEEVGIKVKYLHSDI
KTLERTEIIRDLRLGVFDVLVGINLLREGIDVPEVSLVIILDADKEGFLRNERSLIQTIG
RAARNENGHVIMYADTVTGSMQAAIDETARRRAIQEAYNEEHNITPKTIQKEIRDSIRIT
TAVNNAEENESLMDTIRGMNRNEKEEAVHNVELEMRQAAKDLNFEKAAELRDIILELKAE
YKIK
NT seq 1995 nt   +upstreamnt  +downstreamnt
gtggacggcaagtttgaattagtatcatcctaccaacccagtggggaccaaccccaagcc
atcaaaaaactggttgaaggggtggagaataacgataaggcccaggttcttttgggaggt
accggaaccgggaagacctttaccatggctaatgtcattgcggagaccaaccggccgacc
ctggtcttagcccataataaaactctagccgggcagttgtattctgagctcaaggaattc
tttccgcataatgcagtcgaatactttgtctcttactatgattactaccaaccggaagcc
tatgtgccttccagcgattcctatattgaaaaatcggcctcagtcaatgatgagattgat
aagctccgccactcagccacctcatcgatcctggaacgccgggataccatcattgtggcc
tcggtgtcctgtatctacggtttagtcgacccaatggagtataagaaccatgtgctctcc
atccgccaaggccaagaagttgaccgtaacgactttatgcggcgtttggtggatatgcag
tatgagcgtaatgatattgagttccgccgcgggaccttccgggtgcgcggggatgtggtg
gaagtctttctgccttctagagatagtgaagccatccgagttgagttctttggcgatgag
attgatcgaattcgtcaagtcgatgttttgaccggtgaagtcaaaaatgacgtcaaacac
tatcccatctatccagccactcactttgtggttgattataataagatgcaaagagcggtt
gactccattgaggccgaattagaggtccaattgaagaagtttaatgaccaaggcaaactc
ttagaggcccaacgtctggagcaaagaacccgctacgatattgagatgctattagaaatg
ggctattgtaatgggattgagaactattcccgtcatatggacggtcgggctccgggtcaa
cccccatataccttactggatttcttccctgatgattacctgctcatggttgacgaatcc
cacatgaccatgccccaagtacgcggcatgtacaacggtgacaaggctaggaaggaacag
ctagtcgattatggtttccgcctgccttctgccttagacaaccggcctttgaaattagct
gaatttgaagaacgggttaaccaagccatctatgtttccgctacccctggagactatgaa
attgagaaggctaatggcgaagtcgtagaacaaattatccggccaaccggtctcttagac
cccaaagtggaagttcgccccattaaggggcaaattgatgacttgattagtgaaattaat
gagcgggtagatagaggcgaccgggtctttgtcaccaccttgaccaagaaaatgtcagaa
gacctgactgattacttagaagaggtcggcattaaggtgaaatacctacactcggatatt
aaaaccctagagcggaccgaaattatccgtgacctccgtctgggcgtcttcgatgtcctg
gtggggataaacctcctgcgggaagggatcgatgtgccagaagtgtctctggtgattatc
ttagacgcggataaggaaggcttcctccgtaatgagcggtcgttgatccaaaccattggc
cgggctgctcgtaatgaaaatggccatgtgattatgtatgctgataccgtgaccgggtcc
atgcaggctgccattgatgaaaccgctagacggcgggccatccaagaagcttataacgaa
gagcataacatcaccccgaaaaccatccaaaaagaaattcgtgattccatccgcattact
accgcagtgaataatgcagaagaaaatgaatcgctcatggataccatccggggcatgaac
cgcaatgaaaaagaagaagctgtccacaatgtggaattagaaatgcgtcaagcggctaaa
gacctgaacttcgaaaaagcggctgaattgcgggatatcatcttagaacttaaggcagaa
tataagattaaatga

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