Aerococcus loyolae: CJ190_003145
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Entry
CJ190_003145 CDS
T09408
Symbol
rny
Name
(GenBank) ribonuclease Y
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
aloy
Aerococcus loyolae
Pathway
aloy03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aloy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CJ190_003145 (rny)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aloy03019
]
CJ190_003145 (rny)
Messenger RNA biogenesis [BR:
aloy03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
CJ190_003145 (rny)
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Paralog
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
HDOD
KH_PNO1_2nd
KH_NusA_2nd
KH_KhpA-B
KH_2
KH-I_KHDC4-BBP
DUF8471
Neur_chan_memb
Motif
Other DBs
NCBI-ProteinID:
WIK93119
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Position
708276..709847
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AA seq
523 aa
AA seq
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MDGLTIAFVIVTLIVGLLVGLVIGYKRRQNVEEEERNEAQNTAKGILAQANKDAEAKRKE
ILLDAKEKAQDYRNQVESELSDRRQEITQKEQRLFQREENLDRRENVLTNKENDQLSKEQ
SIQDRLKNVSQKEEEAQAMVQERQDEIERISMMTTEDAKALILKETEANLSNEIALRIRN
AEENYKEQAHKLATSIILQAIETSAADTVADTSVTRIDLPNDDMKGRIIGKDGRNIKTIE
ALTGIDLIIDDTPETVVLSGFDPIRREIARIALENLIKDGRIHPAKIEEAVERARKSMDT
KIRDTGEETTFDLGIHDMHPDLVKLVGRLNYRTSYGQNVLNHSVEVAKLAGIIASELGED
EQLAKRSGLLHDIGKAVDHEVEGTHVEIGTELARKYNENDIVINAIAAHHGDIESASAIA
IIVQVADALSAARPGARSESLENYIQRLRSLEALANEFSGVKKTYAIQAGREIRVIVNPE
KVDDLSVVKMSHDISKRIEDELDYPGQIKVTVIRESRSVDYAR
NT seq
1572 nt
NT seq
+upstream
nt +downstream
nt
atggatggtttaactattgccttcgttatcgttactttaattgttggccttttagtcgga
ttagtaattggttacaaaagacgtcaaaatgttgaagaagaagaacgtaatgaggcgcaa
aatactgcaaaaggaattttagctcaagctaataaagatgctgaagctaaaagaaaagaa
attcttttagatgcaaaagagaaagctcaggattatcgcaatcaagtagaaagcgaatta
agtgaccgtcgtcaagaaattactcaaaaagagcaaagactcttccaaagagaagaaaat
cttgatcggcgtgaaaatgttcttaccaataaggaaaatgatcagctttctaaagagcaa
tcgattcaagatcgcttaaaaaatgtttctcaaaaagaagaagaagcccaagcaatggtt
caggaacgccaagatgaaatcgagcggatttctatgatgactactgaagatgccaaggct
ttgattttgaaagagacagaagcaaacttatctaatgaaattgctttacgaattcgaaat
gcagaagaaaactataaagagcaagcacataagctcgctacttcaattatcttacaagca
atcgaaacatctgctgcggatacagtcgccgatacatcggtaacccgtatcgatttacca
aacgatgatatgaaaggtcgtatcattggtaaagatgggcggaatatcaaaaccattgaa
gccttgactgggatcgatttaattatcgacgacaccccagaaacggtggtacttagtggt
tttgacccgattcgtcgggaaattgctcgtattgctttagaaaatctaattaaggatgga
cgtattcatccagcaaaaattgaagaagcggttgaacgtgctagaaaatcaatggataca
aaaattcgtgatactggggaagagacaacctttgacctaggtattcatgacatgcatcca
gacttagtcaagttagtcggacgtttaaactaccgcaccagctatggacaaaatgtcttg
aaccatagcgtcgaagtagcaaaactcgctggaattattgctagtgaactcggcgaagat
gaacaactggctaaacgaagtggattattacatgatattggcaaagctgtggaccacgag
gtggaaggtacccatgttgaaattggtactgaactcgctcgtaaatataatgaaaatgat
atcgttattaatgccattgcggcccaccatggagatatcgaatctgcttctgccattgcc
attattgttcaagtcgctgatgccttgtcagctgctcgtcccggtgctcgcagtgaatca
ttagagaattatattcaacgtttaagaagtttagaagccctagccaatgaatttagtggt
gtgaagaagacatacgctattcaagcaggtcgcgaaattcgtgtgattgttaaccccgaa
aaggtggatgacttaagtgtcgttaagatgtcacatgatatttctaaacgtattgaagac
gaactggattacccaggccaaattaaggtgacggtaatacgtgaatcccgttctgtggat
tatgcaagataa
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