KEGG   Aerococcus loyolae: CJ190_003145
Entry
CJ190_003145      CDS       T09408                                 
Symbol
rny
Name
(GenBank) ribonuclease Y
  KO
K18682  ribonucrease Y [EC:3.1.-.-]
Organism
aloy  Aerococcus loyolae
Pathway
aloy03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:aloy00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    CJ190_003145 (rny)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:aloy03019]
    CJ190_003145 (rny)
Messenger RNA biogenesis [BR:aloy03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     CJ190_003145 (rny)
SSDB
Motif
Pfam: RNase_Y_N HD KH_1 HDOD KH_PNO1_2nd KH_NusA_2nd KH_KhpA-B KH_2 KH-I_KHDC4-BBP DUF8471 Neur_chan_memb
Other DBs
NCBI-ProteinID: WIK93119
LinkDB
Position
708276..709847
AA seq 523 aa
MDGLTIAFVIVTLIVGLLVGLVIGYKRRQNVEEEERNEAQNTAKGILAQANKDAEAKRKE
ILLDAKEKAQDYRNQVESELSDRRQEITQKEQRLFQREENLDRRENVLTNKENDQLSKEQ
SIQDRLKNVSQKEEEAQAMVQERQDEIERISMMTTEDAKALILKETEANLSNEIALRIRN
AEENYKEQAHKLATSIILQAIETSAADTVADTSVTRIDLPNDDMKGRIIGKDGRNIKTIE
ALTGIDLIIDDTPETVVLSGFDPIRREIARIALENLIKDGRIHPAKIEEAVERARKSMDT
KIRDTGEETTFDLGIHDMHPDLVKLVGRLNYRTSYGQNVLNHSVEVAKLAGIIASELGED
EQLAKRSGLLHDIGKAVDHEVEGTHVEIGTELARKYNENDIVINAIAAHHGDIESASAIA
IIVQVADALSAARPGARSESLENYIQRLRSLEALANEFSGVKKTYAIQAGREIRVIVNPE
KVDDLSVVKMSHDISKRIEDELDYPGQIKVTVIRESRSVDYAR
NT seq 1572 nt   +upstreamnt  +downstreamnt
atggatggtttaactattgccttcgttatcgttactttaattgttggccttttagtcgga
ttagtaattggttacaaaagacgtcaaaatgttgaagaagaagaacgtaatgaggcgcaa
aatactgcaaaaggaattttagctcaagctaataaagatgctgaagctaaaagaaaagaa
attcttttagatgcaaaagagaaagctcaggattatcgcaatcaagtagaaagcgaatta
agtgaccgtcgtcaagaaattactcaaaaagagcaaagactcttccaaagagaagaaaat
cttgatcggcgtgaaaatgttcttaccaataaggaaaatgatcagctttctaaagagcaa
tcgattcaagatcgcttaaaaaatgtttctcaaaaagaagaagaagcccaagcaatggtt
caggaacgccaagatgaaatcgagcggatttctatgatgactactgaagatgccaaggct
ttgattttgaaagagacagaagcaaacttatctaatgaaattgctttacgaattcgaaat
gcagaagaaaactataaagagcaagcacataagctcgctacttcaattatcttacaagca
atcgaaacatctgctgcggatacagtcgccgatacatcggtaacccgtatcgatttacca
aacgatgatatgaaaggtcgtatcattggtaaagatgggcggaatatcaaaaccattgaa
gccttgactgggatcgatttaattatcgacgacaccccagaaacggtggtacttagtggt
tttgacccgattcgtcgggaaattgctcgtattgctttagaaaatctaattaaggatgga
cgtattcatccagcaaaaattgaagaagcggttgaacgtgctagaaaatcaatggataca
aaaattcgtgatactggggaagagacaacctttgacctaggtattcatgacatgcatcca
gacttagtcaagttagtcggacgtttaaactaccgcaccagctatggacaaaatgtcttg
aaccatagcgtcgaagtagcaaaactcgctggaattattgctagtgaactcggcgaagat
gaacaactggctaaacgaagtggattattacatgatattggcaaagctgtggaccacgag
gtggaaggtacccatgttgaaattggtactgaactcgctcgtaaatataatgaaaatgat
atcgttattaatgccattgcggcccaccatggagatatcgaatctgcttctgccattgcc
attattgttcaagtcgctgatgccttgtcagctgctcgtcccggtgctcgcagtgaatca
ttagagaattatattcaacgtttaagaagtttagaagccctagccaatgaatttagtggt
gtgaagaagacatacgctattcaagcaggtcgcgaaattcgtgtgattgttaaccccgaa
aaggtggatgacttaagtgtcgttaagatgtcacatgatatttctaaacgtattgaagac
gaactggattacccaggccaaattaaggtgacggtaatacgtgaatcccgttctgtggat
tatgcaagataa

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