Aerococcus loyolae: CJ190_004125
Help
Entry
CJ190_004125 CDS
T09408
Symbol
addA
Name
(GenBank) helicase-exonuclease AddAB subunit AddA
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
aloy
Aerococcus loyolae
Brite
KEGG Orthology (KO) [BR:
aloy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aloy03400
]
CJ190_004125 (addA)
Enzymes [BR:
aloy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CJ190_004125 (addA)
DNA repair and recombination proteins [BR:
aloy03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
CJ190_004125 (addA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
DEAD
AAA_12
ResIII
DUF2059
AAA_16
Motif
Other DBs
NCBI-ProteinID:
WIK93279
LinkDB
All DBs
Position
897872..901720
Genome browser
AA seq
1282 aa
AA seq
DB search
MTIPIKPQNATYTDQQWSAIHLNQHNLLLSASAGSGKTRVLVERIINQVKSGRKLSELLV
VTFTELAAKEMKERIEKSLKDEINRELDTQKRLHLQREVQALPQANISTIDAFCRQVINR
YYYLIDLDPKFRLVTDETEWLLFYEKVWKKLKEDLLDSESDIYSQYHDDFIILSNNYSDG
RQASDDKLSQLIFDLYNKARSHANPIGWLQDSLKYYQADKTYSQSNFYRQELVPYLSQLL
ENRYIKAFTAYEESIPNQGLEGDERGEGIQKLIAGIQEQKQFFIHLKDLLENKDYQAAYK
HFNNRPKFAFINYKVKAKSPAMDQKKALRSAYSQLLKDLQLNAKINQTDLYKFLAFDEET
TNKMLEKSYDLASAIVHLCQLFIDRMQAKMLEEKQLDFQAIELYTYQILSPTDPDKNEAL
LYYQSRFKEVMVDEYQDVNGLQEAIIQAVSQEDRSHNRFMVGDVKQSIYRFRYADPKLFM
DKYQRYANFDDQTPPFEEPSYRINLAENFRSRPEILSFVNFVFSQLMDEKIGGVDYLSEG
QLSVGATWYPDLEGYETEVLLVEENEDYRQSLDSNQELSRTELQAEVIAQKITSLMQKGF
KIYDKDAISEDKMRPLRYSDIVILGSNRTFYQGLENIFSQYDIPIMQDKKQNYFQRTEIM
TMVELLKLIDNPYQDIPLAAVLRSPIIGLTEPEMAQIRMAEREGTYFEAVQSYIESHQNE
KDNDLFNKLQQLLDWLQFWRSFTKEHSIAQLIWQIYQDTGYLDYVSGMTNGLQRESNLHG
LYKRAYDFEENQFKGLFQFIRFIEKMQEREKDLESPQTIDLNQNAVQLMTVHASKGLEFP
VVFYFNMAKGFNVDDLKNELLINDQIGIGVKVKDRFNGISYSNPIRLLAEHYERLELSAE
EQRKLYVALTRAEQKLYLVGATEDQDKTFDQWIKWADLSQKNQVIDESLCAISSQSDNIQ
KWIGTTIVRHPDFRNKSHYDQAAQSSYQSVTTDFHIHVVNEEELLTQTAFQNIQLAPEKV
SVKEEDPQTEIISSPLDYDYPYREASQTSSYQSVSELKRLFEEPEDERQVQWSYSKSQSE
AVQGLRFTPSHYPAPEFIQSQAEHSPSEHGSAIHLLLQAIDLKVMPSFDSLVASYKGLVD
KGLLEESSLSDADLQQLLAFFETTMGKRIIHPKSQVYREQPFSYLLPYRQLKSSTGLAPN
DKVLIHGIIDGFLIDENNQVWLFDYKTDHIGYLPAKEQRQVLLKRYRVQMSLYKKALTSI
LERPVDYAVLIALDSLETFPVE
NT seq
3849 nt
NT seq
+upstream
nt +downstream
nt
gtgacaataccaattaaaccgcaaaatgcaacttatacggaccaacaatggtctgctatt
catttaaaccagcataatttattactttcggcctcagcgggctcaggaaaaacccgggtc
ttggttgagagaattattaatcaggtgaaaagtgggcgtaagctatccgaactcttagta
gttacttttaccgaattagcggctaaggaaatgaaagagcggattgagaaaagcttaaaa
gatgaaattaaccgtgagctagatacccaaaaaagactccatctccaaagggaagttcaa
gccctgcctcaagccaatatatcgaccattgatgccttttgtcggcaagtgatcaatcgc
tactattatctaattgatctggatcccaaatttcgcctagtgaccgatgagacggaatgg
ttactcttttatgagaaagtttggaaaaagttaaaagaagaccttttagatagtgaaagt
gatatatatagccaataccatgatgattttattattctcagcaataattattcagatggc
cggcaagcgagtgatgataagcttagccagttaatttttgatttgtataataaggcacgt
tctcacgccaaccccataggatggctacaagactccttaaagtattatcaagctgacaaa
acttactcccaaagcaatttttaccgccaggagctggtcccttatttatcccagctacta
gaaaatcgctatatcaaagcctttactgcctatgaagaaagtattcccaatcaaggccta
gaaggagatgaaagaggcgaaggcattcagaaattgatagccggtattcaagaacaaaag
cagttttttatccatttaaaagacctcctagaaaacaaggactatcaagcagcctataag
cattttaacaaccggcccaaattcgctttcattaactacaaggttaaggccaagtctcca
gctatggatcaaaaaaaggctctaagatctgcttatagtcaactgctaaaggacttacaa
ttaaatgctaaaatcaaccagactgacctctataagttcttggcctttgatgaagagacc
acaaataaaatgctggaaaagagctatgacttagcttcagccattgttcatctttgtcaa
ttattcattgatcgcatgcaagcaaaaatgcttgaagaaaagcaactagactttcaagct
attgaattatatacctatcaaattttaagtccgactgatcctgacaagaatgaagccctg
ctttattatcagtctcgctttaaagaggttatggttgatgagtatcaggatgtcaatggc
ctgcaagaggcgattattcaagcggttagtcaagaagatcgttcccataatcgttttatg
gtaggggatgtgaagcaaagcatctaccgcttccgatatgctgatcctaaattatttatg
gataaataccagcgttatgctaactttgatgatcaaacgccgccttttgaggagccttct
tatcgaatcaatctagcggaaaatttccgtagtcgccctgagattttaagctttgtcaac
tttgtgttttctcaattaatggatgaaaaaatcggtggagtcgattatctttcggaaggg
cagttaagtgtgggagccacttggtacccagacctcgaaggctatgaaacggaagtcttg
ttagtagaagaaaatgaagattaccgtcaaagcttagatagtaatcaagaactgtctcga
accgaactccaagcagaagtgattgcccaaaaaataacttcactcatgcaaaagggcttt
aagatctatgataaggatgcaattagtgaagataagatgcgcccgctacgctatagtgat
attgttattttaggaagtaatcgtactttctatcagggtttagaaaatattttctctcaa
tacgatataccgattatgcaagacaaaaagcaaaattatttccaacggactgaaattatg
accatggtagagctgttgaaattaattgataatccttaccaagatattcccttggcagct
gtattacggtcacccattatcggcttgactgaaccagaaatggcccagatacgcatggct
gagcgggaggggacttattttgaagcggtccaatcttatattgaatctcatcaaaatgaa
aaggacaatgacctatttaataaactccaacaactgctcgattggctccagttttggcgt
agtttcactaaagaacactcgatagcccaattaatttggcaaatctaccaagacacaggc
tatttagactatgtgagtgggatgaccaatggtttacaacgagaaagtaatttacatggc
ttatataaaagagcctatgattttgaggaaaaccaatttaaaggtctttttcaatttata
cgtttcattgaaaagatgcaggaacgtgagaaggacttagaaagtccgcaaaccattgat
ctcaatcaaaatgcagtccagttaatgaccgttcatgctagtaaaggactagaattccct
gtggtattttatttcaatatggctaagggattcaacgtcgacgatttgaagaatgaactt
ttgattaatgaccaaatcggtattggggttaaagtcaaagaccgtttcaatggcatcagc
tatagcaacccgattcgtttattagctgaacactatgagcgtcttgaacttagtgcagaa
gaacagcgtaaattatatgtggccttaacccgggctgaacaaaaactttatttagtaggt
gcgacagaagaccaagataaaacttttgatcaatggattaaatgggccgacttgagtcaa
aaaaatcaggtcatcgatgagagtctgtgcgctatttctagtcaaagtgataatatccaa
aagtggattggtacaacaattgtccgccatcctgattttagaaataaaagtcattatgac
caggcggcccaatccagctatcaaagcgtgactacggattttcatatccatgtggtgaat
gaggaagaactcttgacccagacagcctttcaaaatattcaacttgcgcccgaaaaagta
agcgttaaggaagaggatcctcaaaccgagatcatttcatcgcctttagattatgactat
ccttatcgggaggctagtcagaccagtagttatcaatctgtatcggaattaaagcgactc
tttgaagaaccagaagacgagcgtcaagtgcagtggagctattcaaagagtcaaagtgaa
gcagtccaaggtttgcgatttactcctagtcactatcccgctccagaatttattcagagt
caagcggagcatagtcctagtgagcatggctcagccatacatttactcttacaagcgatt
gacttaaaggtcatgccaagcttcgattcactagttgcaagctataagggcttagttgat
aagggtctgctcgaagaaagtagtttaagcgatgctgatttacagcagttgctggctttc
tttgaaaccactatgggtaaaaggatcattcatcctaagagccaagtttaccgtgaacaa
cctttttcctatttactaccttatcgccaactcaagtcctctacaggactagcccctaat
gataaggtccttattcacggaattatcgatggcttccttattgatgaaaataaccaggta
tggctgtttgactataaaactgatcatatcggctacttacccgctaaagaacaaaggcaa
gttctgttgaaacgctaccgagttcaaatgtcgctttataaaaaagctttaacttcaatt
ttagaaagaccggtggattatgcggtcttgatagcccttgattctttagaaactttcccg
gtggaataa
DBGET
integrated database retrieval system
