Aerococcus loyolae: CJ190_004350
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Entry
CJ190_004350 CDS
T09408
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
aloy
Aerococcus loyolae
Brite
KEGG Orthology (KO) [BR:
aloy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
aloy03016
]
CJ190_004350 (truB)
Enzymes [BR:
aloy01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
CJ190_004350 (truB)
Transfer RNA biogenesis [BR:
aloy03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
CJ190_004350 (truB)
Prokaryotic type
CJ190_004350 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
CED4_WHD
Motif
Other DBs
NCBI-ProteinID:
WIK93322
LinkDB
All DBs
Position
951013..951924
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AA seq
303 aa
AA seq
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MDGIIPLWKERGMTSHDCVNALRKLLKTRRVGHTGTLDPNVSGVLPICVNKATKMANWIT
DKQKVYQGEITLGFQTETEDLDGKIVRQTPVKEAVDGQLIQKAMNSMIGTITQVPPMYSA
VKVNGRKLYDYARHGEKVDRPKRQVNVYEFDLLKPCRYDQDQQVQSFNFRVRCGKGTYVR
TLASDLGEALGYAATMTDLSRIASSPFTQSQCFTLSEIEEQISQGKKDFIFPIDFLIQDL
AHIEISGKLEKLVSNGAVLNKNNLAEEYRDQLPVAFYGQQGLMAIYGQHPSDEEQMKPLK
MLI
NT seq
912 nt
NT seq
+upstream
nt +downstream
nt
atggatggcataattcctttatggaaggaaagagggatgactagtcacgattgtgtcaat
gccttacgtaaattgttaaaaacaagacgggtgggccacaccggtaccttggatcccaat
gtgagtggcgtattgccaatttgtgtgaataaggcgacaaaaatggctaattggatcact
gataagcaaaaggtctatcaaggagaaattaccctaggctttcaaacagaaacagaagat
ttggacggaaaaattgttcgccaaacgcctgtgaaagaagctgtcgatggtcagcttatt
caaaaagctatgaatagcatgataggtacaattactcaggttccacccatgtattctgct
gttaaggttaacggccgaaagttatatgactatgcccgccatggtgagaaggtggaccgc
ccgaaaaggcaggttaatgtctatgaatttgaccttctaaagccctgccgatacgatcaa
gaccagcaagtgcaaagttttaatttccgtgttcgttgtggcaagggaacctatgtgagg
acccttgcttcggacttaggagaggcactaggctatgctgcgactatgaccgaccttagt
cggatagcctcaagcccctttacccaatcacaatgctttactttatctgaaattgaagaa
caaattagtcaaggaaaaaaagattttatttttcctatcgattttttgatccaagactta
gctcatattgagattagtggcaaattagaaaaactcgtcagcaacggggcggttttaaat
aaaaataatttggccgaagaatatcgagaccaattgccggtagctttttatggccagcaa
ggacttatggctatttatggacaacatcccagtgatgaagaacaaatgaaaccgttaaaa
atgctgatataa
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