Aerococcus loyolae: CJ190_004455
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Entry
CJ190_004455 CDS
T09408
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
aloy
Aerococcus loyolae
Brite
KEGG Orthology (KO) [BR:
aloy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
aloy03032
]
CJ190_004455 (topA)
03400 DNA repair and recombination proteins [BR:
aloy03400
]
CJ190_004455 (topA)
Enzymes [BR:
aloy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
CJ190_004455 (topA)
DNA replication proteins [BR:
aloy03032
]
Prokaryotic type
DNA Topoisomerases
CJ190_004455 (topA)
DNA repair and recombination proteins [BR:
aloy03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
CJ190_004455 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Toprim_4
DUF6495
Toprim_2
Zn_ribbon_RPB9
HypA
Auto_anti-p27
Motif
Other DBs
NCBI-ProteinID:
WIK93342
LinkDB
All DBs
Position
973142..975232
Genome browser
AA seq
696 aa
AA seq
DB search
MATKRKKTPKKDLVIVESPTKAKTIEKYLGRKYKVVASKGHLRDLPKSKMGIDIENNYDP
HYITIRGKGDTIKDLKKEAKKANNIYLASDPDREGEAIAWHLAHILKLDPEEDIRVTYNE
ITKDTVKEAINNPRAIDKDLVDAQQARRILDRLVGYNLSPILWAKVKKGLSAGRVQSVAL
KMVVDREEEIRNFVPEEYWSIEGVFQKGKETFKANASKFKGKKIDLKNEDDVKALMANIS
SDQFEVQNLTKKQRKRNPQKPFTTSSLQQEASKRLRFRTRKTMMVAQQLYEGIKLGSEGT
VGLITYMRTDSTRISDGAKQEAGQFIQDKYGKEYIGKGTSGASGQGAQDAHEAIRPTSAF
RHPDSVEAYLSKDQFKLYSLIWSRFMASEMAPAVYDTVACDLVQNDVSFRANGSKIKFTG
YLRVYPDNNEKDNLLPELENGEKVKSKELTPNQHFTQPPARYTEASLIKTLEELGVGRPS
TYSPTLETLIKRYYVKLEARRFEPTELGEIVNSLISEFFPDIVDPQFTANLEDELDHVED
GNKNWIDVVDAFYQPFSKDIEKADQEMEKIEIKDEPAGFDCDVCGHPMVIKLGRYGKFYA
CSNFPDCRNTKAIVKEIGVNCPTCKEGQVVERKSKKKRIFYGCSRYPDCDFVSWDKPVGR
SCPKCDHYLVEKKKRGSKQVICSNCDYKEDVQKGDD
NT seq
2091 nt
NT seq
+upstream
nt +downstream
nt
ttggctacaaaaagaaagaaaacacctaaaaaagatttagtgattgtcgaatcaccaact
aaagcaaaaacgattgagaaatacttaggacgtaaatataaagtggtggcaagtaagggc
cacttacgtgatcttcctaaaagtaaaatgggcatcgatattgaaaataattatgatccc
cattatattacgattcgtggtaagggagatacgatcaaagatctaaaaaaagaggctaaa
aaagcaaataatatctacttagcttctgacccggaccgggaaggagaagcgattgcttgg
cacttagcccatattttaaaattagatcccgaagaagatatccgggtcacttataatgaa
atcaccaaggatacggttaaagaagcaatcaacaatccacgagccatcgataaggacttg
gtggacgctcagcaggctagacggatcttagaccgcttggtgggctataatttgtccccc
attctatgggctaaggtcaagaagggtttatccgctgggcgggtacaatctgttgccttg
aaaatggtcgttgaccgcgaagaggaaatccgtaactttgtgcctgaagaatattggagc
attgaaggggtatttcaaaaaggaaaagaaactttcaaggcaaatgcttccaaatttaag
ggtaaaaaaattgatttaaaaaatgaagatgatgttaaagccttaatggctaatatcagc
agtgatcaatttgaagttcaaaacttgaccaaaaaacaaagaaaacgtaatccccaaaaa
ccttttacgacttcttccctccaacaagaagcttccaaacgtttacgctttagaacacga
aagacgatgatggttgcccaacagttatatgaagggattaaattaggcagtgaagggaca
gtgggtttaattacctacatgcgtacagactccacccggatctctgatggtgctaaacaa
gaagccggccaatttatccaagacaaatacggtaaggaatatatcggtaaggggaccagt
ggtgctagtggacaaggtgcccaagatgcccatgaggcgattagaccgacatctgccttt
cgtcatcccgatagcgttgaagcttatctcagtaaagatcagttcaagctgtatagcctt
atttggtctcgttttatggctagtgaaatggcgccagccgtctatgatacagtagcctgt
gatctggttcaaaatgatgtgagctttcgggcgaacggatcaaaaattaaatttactggt
tacctcagagtttatcccgataataatgaaaaggataatctcttgccagaactagaaaac
ggtgaaaaggtaaagagtaaagaattaactcctaaccaacatttcacccaaccaccagct
cgctatactgaagcgagcttaattaagactttagaagaattaggggttggccgtccttct
acttactcaccaactttagaaaccctgattaagcgctactatgttaaattagaagctaga
cgcttcgaacccactgaattaggtgagattgttaatagtttaatttctgaatttttccct
gatatcgttgatcctcaatttaccgctaacttggaagatgaattagaccatgtggaagat
ggtaataagaattggatagacgtcgttgatgctttctatcaaccttttagcaaggatatt
gaaaaagctgaccaagaaatggaaaaaatcgaaattaaagacgaaccagcagggtttgat
tgtgacgtctgtggtcatccaatggttatcaaattaggacgttatgggaagttttatgca
tgtagtaatttccctgattgccgtaatactaaagccattgttaaagaaattggcgtgaat
tgcccaacctgtaaggaaggacaagttgtcgaacggaaatcgaagaaaaaacggatcttt
tacggttgttcccgctatcctgattgtgattttgtctcctgggataaacctgtgggccgt
tcctgtcctaaatgtgaccattacttggttgaaaagaaaaaacgcggctctaaacaagtg
atttgtagtaattgtgactataaagaagatgtccaaaaaggcgatgattag
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