Aerococcus loyolae: CJ190_005090
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Entry
CJ190_005090 CDS
T09408
Name
(GenBank) ATP-dependent RecD-like DNA helicase
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
aloy
Aerococcus loyolae
Pathway
aloy03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
aloy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
CJ190_005090
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aloy03400
]
CJ190_005090
Enzymes [BR:
aloy01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
CJ190_005090
DNA repair and recombination proteins [BR:
aloy03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
CJ190_005090
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_19
AAA_30
HHH_RecD2
OB_YrrC
SH3_13
UvrD_C_2
Viral_helicase1
AAA_11
AAA_22
UvrD_C
UvrD-helicase
CodY
nSTAND3
AAA_28
AAA_12
HHH_5
T2SSE
AAA_25
NPHP3_N
SLFN-g3_helicase
TrwB_AAD_bind
AAA
AAA_29
WHD_HELB
NTPase_1
Motif
Other DBs
NCBI-ProteinID:
WIK91755
LinkDB
All DBs
Position
complement(1108880..1111345)
Genome browser
AA seq
821 aa
AA seq
DB search
MAATEDYFIGEVEATFFSNPDNYYRVMRITVDDTNTLYSEKNIVVTGNFGTIQDGTTYQF
FGNLVDHPKYGVQFKVSHYEGIKITSKDGLIKYLSSDEFPGIGKILAERVVNTLGEKTID
LIVNQPERLKEVKGLTKNKQQMLHEKVKANRGNEDTFIQLSEMGFSNHLAGKIYAKYQDE
AVELIKENPYFLVKNIQGFGFQKADLLAQRLDFAYDSPLRIQGAITFSLETICYSNGDTY
VKKEELFQQVLNLLNKSQVNLQMVDMKQVADSLSDLVDTNEVIATEEGYFLPSLYYAEKG
IVKRLKRIKNERTQPKYENDNLANEIEKTEAKLGIQYGPAQRKAIIEALEEKLFILTGGP
GTGKTTVLEGIIDIYCRLNNIRLGDYDPSDFPIRLAAPTGRAAKRMSETTGLVATTIHRL
IGLTGEEDENSIITSDKETIEGDLLIIDEMSMVDTWLFFQLLEAVPDDMQIILVGDKDQL
PSVGPGQVLSDLLRSQTITWRELDEIFRQDANSTITLLAHDIKNGEMPVDLTQNKADRSF
FRVDYFHLADFIAAVAKRALDKDYDVKDIQVLAPMYKGQAGIDQINQKLQESLNPNSDGN
KRQLSHFNRLFRLGDKVLQLQNHAEMNVFNGDMGEIVAIFYAKETTSQSDEIVVDFDGNE
VTYNRSDFNQLTLAYCVSIHKSQGSEFPIVILPLISQYQRMLQRNLLYTAITRAKQSLIL
CGEVQAFQSAIQTQASQRHTNLYRSLLEEDELLPKLNSQPSEASPSQDQSTRSQGDESGN
QQEGTGNSGMDVKVDWLTPALLESGQIDPLIGMDGISPYDF
NT seq
2466 nt
NT seq
+upstream
nt +downstream
nt
atggcagcaacggaagattatttcatcggcgaggttgaagctacctttttttctaatcca
gataattattatcgggtgatgcggattacggttgatgataccaacaccctttactccgag
aaaaatattgtggtgacaggaaattttgggactatccaggacggaaccacttaccaattc
ttcggtaacttggttgaccatcctaagtacggggtacaattcaaggtttcccattatgaa
gggataaaaattaccagtaaagatggtctaattaaatatttatccagcgatgaatttcct
ggaattgggaaaatactggctgaacgtgtggtcaataccttaggtgagaagaccattgac
ttaattgtaaatcaacccgaacgtttgaaagaagttaagggcctgacgaaaaataaacag
caaatgctacatgagaaagtaaaggctaatcgtggcaatgaggatacctttattcaatta
tcagagatgggcttttccaaccacttggcaggcaagatctatgctaaataccaagatgaa
gcggttgaattgattaaagaaaatccctatttcttggttaaaaatattcaaggttttggt
tttcaaaaggctgatttactggctcaacggttagactttgcctatgactcgcctttacgc
atccaaggggcgattactttttctttggaaacgatttgttatagcaatggggacacttat
gttaagaaggaagaactatttcagcaggttctcaatctattaaataaaagccaagtgaat
ctgcaaatggttgacatgaagcaagtggctgatagcttgagcgacttggtagataccaat
gaagtgattgcgactgaagagggttatttccttcctagcctctattatgcagagaagggg
attgttaaacgtttaaaacgtatcaagaatgaacgaactcagcctaaatatgagaatgat
aatttggctaatgaaatagagaaaaccgaagcaaaattaggcattcaatatggacccgct
caaaggaaggcaattatcgaagccctagaagagaaattatttattctaactgggggaccg
ggtacgggaaaaactacggttctagaaggaatcatcgatatttattgccggttaaataat
atccgcctaggggattatgacccgagtgatttccctattcgtttggcagctccaactgga
cgtgctgccaagcggatgagtgaaactactggcctagtggcaactactattcaccgttta
attggtctcaccggtgaagaagatgaaaatagtatcataacttctgataaggaaacgatt
gaaggggacttactgattattgatgaaatgtccatggtagatacctggttattctttcag
ttattagaagcggttcctgatgatatgcaaattatcttggtaggggataaagatcaactg
ccctcagtcggtccaggacaagtgctttctgacctcttgagaagtcagacaatcacctgg
cgtgagctcgacgaaatatttcgtcaagatgccaattcaactatcactttattggctcat
gatataaaaaatggggaaatgcctgtcgatcttacccaaaataaggctgaccggtcattt
ttccgggtagattatttccacttagctgattttatcgcagcggtggctaaacgagctctc
gataaagactacgatgttaaagatattcaagttttggcccccatgtataagggtcaggcc
ggaatcgatcagattaaccagaaattgcaggaaagtttaaatccgaatagtgatgggaat
aagcgccaacttagccactttaaccgtctctttcgcttaggggataaggtcttgcagttg
caaaatcatgctgaaatgaatgtttttaacggggatatgggagaaatcgtggcgatattc
tatgccaaggaaacgaccagccaaagtgatgaaattgtggttgacttcgacggcaatgag
gtcacatataaccggtcagattttaaccagttaaccttggcgtattgcgtctcaattcat
aaatcgcagggaagcgaatttcctatcgttatcctccccttaatcagccaatatcaacgc
atgctgcaacgcaatttgctctatacagcgatcaccagggctaagcaatccttaattctc
tgtggtgaagtccaagccttccaatctgccattcaaacccaggccagccaacgccatact
aacctttaccgctccctacttgaagaagacgaattacttcctaaactgaactcgcagcca
agtgaagcaagtcctagtcaggatcaaagtaccaggtctcaaggagatgagtcagggaac
cagcaagagggtactggaaactcaggaatggatgtgaaagtcgattggttaacccctgcc
ttacttgaaagtggtcagattgatcctttaattggtatggatggcatcagcccctatgat
ttttaa
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