KEGG   Aerococcus loyolae: CJ190_005480
Entry
CJ190_005480      CDS       T09408                                 
Symbol
cas8c
Name
(GenBank) type I-C CRISPR-associated protein Cas8c/Csd1
  KO
K19117  CRISPR-associated protein Csd1
Organism
aloy  Aerococcus loyolae
Brite
KEGG Orthology (KO) [BR:aloy00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:aloy02048]
    CJ190_005480 (cas8c)
Prokaryotic defense system [BR:aloy02048]
 CRISPR-Cas system
  Type I CRISPR-Cas system
   Subtype I-C factors
    CJ190_005480 (cas8c)
SSDB
Motif
Pfam: Cas_Csd1 WDR72_alpha-sol SHMOOSE
Other DBs
NCBI-ProteinID: WIK91828
LinkDB
Position
complement(1210159..1212132)
AA seq 657 aa
MNVLTSLYQSYLQCEENGLVDQTENLSKGDPVLLPIFHSNRSAGKKDTIEVVLDEQGKFH
SADYLEEGEALIFPITHESIVRSGSKTAPHALADQLSYLCPDFDQDKFEAYLDQLKDWFS
YSQGSSVEGHLKTIFDYLKSQSLTEDIIHSLSPDAKNVVLKDKKIEFDYQDKKNTINSTI
FITFRILQIDAKDFSVSNSQALHQNYIAFVQSQLDQLPHQICQISGQEMFCAKNHRGIIG
NAKLISVSNHIETYKGRISDKDKVTSIGYETSQKIHNMLKYLMDNRETATYMKDGCVLLT
WSSKHIKDNQIPLVEGQTFFSENEDDNNTFSASDASLLDMGTMETFDYKPDELDANAFRQ
AFIGKMEEKDRDITLEDFFVLLIQKISNGRVAIKYFREIALDQYVDQLAVWYESTYWTFG
APGYRHVQSPSFYNIARFTYGISEEKRILPAKDKVQNLVYQKLLPCLVDGRKFPLDIIQK
MALNVSQRNRYRKTWLTLVNYACAIMKKYYWDYEKKEVSEAVDRENQSLSYLYGRLAAVY
EVMELTASPVNDSEDSKKKIKVTNVEKYWSQLMNYPMDAFQVVNERIMPYRIRLKKDGKY
YRRYERFEREILNQIDDLEVDAKQGNRKVGFDFILGYQAQKREIYKKSSKNNPVEAK
NT seq 1974 nt   +upstreamnt  +downstreamnt
atgaatgtcttaaccagtctctatcagtcatacttacaatgtgaagaaaatggtctggtg
gatcaaactgaaaatctcagcaaaggggatccggttctattaccgatctttcattctaat
cgctcagcaggtaaaaaagatactattgaagtggttttagatgagcaggggaaatttcat
agtgctgattatttagaggaaggggaggcccttattttcccgattacccatgaatccatc
gtgcgctcgggaagtaagactgctcctcatgcattagccgaccaattatcctatctctgt
cccgattttgatcaagataagtttgaagcttatttggaccaattaaaagattggttttca
tacagtcaagggagttctgttgaagggcacttaaagactatttttgattatttgaaaagt
caaagtctgacagaagacattatccattctttatctccagacgctaaaaatgtggtatta
aaagataaaaagatcgaatttgactatcaagacaagaaaaatactatcaattcgactatt
tttattactttccgtatcttacaaattgacgctaaagacttttctgtttcaaatagtcag
gctttacaccaaaattatattgcctttgtccaatcgcaattggatcaattacctcatcaa
atttgccaaatttctggtcaggagatgttttgtgccaaaaatcaccggggtattatcgga
aatgccaaattgatttcggtaagtaaccatattgaaacctataaaggtagaatttctgat
aaggataaggtaactagtattggttatgagacctctcagaaaattcataatatgttgaag
tacttgatggataatcgggaaactgccacctatatgaaggatggttgcgtattgttgact
tggtctagtaaacatattaaggataatcagattcccttggttgaagggcaaaccttcttt
agcgagaatgaagatgataataataccttttcggcttcagatgcatcgctattagatatg
gggactatggaaacatttgactataaacctgatgagctggatgctaatgcctttcgacaa
gccttcattggcaaaatggaggaaaaagatcgcgatatcaccttggaagatttctttgtt
ttacttattcaaaagattagtaatggccgagtcgccattaaatatttcagagagatagct
ttagaccaatatgtagaccaactcgctgtctggtatgaatcgacctattggaccttcgga
gctcctggttatcgtcatgtgcaatctccttcattttataatattgctcgttttacttat
gggattagtgaagaaaagcgcattttaccagctaaagacaaggttcaaaacctcgtctat
cagaagctattgccatgtttagtggatggtcggaagtttcctttggatattattcaaaaa
atggctctcaatgtgtcacaaagaaatcgctatcgaaaaacctggctgactttagtgaat
tatgcctgcgcgattatgaaaaaatactattgggattatgaaaagaaagaagtgagtgaa
gctgtggatagagagaaccaaagtttaagttatttatacggccgtttagctgcggtttac
gaagtcatggaacttactgcttctccggtcaatgattcagaagatagtaagaagaaaatt
aaagtaaccaatgttgaaaagtactggagtcaattgatgaattaccccatggatgccttc
caagtggtcaatgaacgaattatgccttaccgaattcgtttgaaaaaggatggtaaatat
taccgtcgttatgaacgctttgagcgggaaatccttaaccaaattgatgacttggaggtt
gatgcaaagcagggtaatcgcaaggtaggctttgacttcatcttaggttatcaagcacaa
aaacgtgaaatttataagaaaagcagtaaaaataatccagtagaagcgaaatag

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