Aerococcus loyolae: CJ190_006575
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Entry
CJ190_006575 CDS
T09408
Name
(GenBank) HD domain-containing protein
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
aloy
Aerococcus loyolae
Brite
KEGG Orthology (KO) [BR:
aloy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aloy03019
]
CJ190_006575
Messenger RNA biogenesis [BR:
aloy03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
CJ190_006575
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HD
tRNA_anti-codon
TraI_2
Motif
Other DBs
NCBI-ProteinID:
WIK92039
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All DBs
Position
complement(1458232..1459197)
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AA seq
321 aa
AA seq
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MDKRLIYEIPQNEKFDLYILIKNANVRTDRNGRDFIAFTFQDKSGTIDGMYWSAMEDEVE
AFQSGRVVRLKGHRELYNGQPQVKISGLRLAHDGEPNDPSLFIADGPMKVEDMKAEIEAG
IKSIMHPVLKKIVGSIMTEYDDIFYQYPAAKRHHHAFVGGLAFHTVSMLRLAQAIAKLYP
NVDKSLLYAGVILHDAAKVIEFVDPLSGDYSIEGNLIGHISLMGQKISLTAEQLGYRQDE
EAVVLLKHMILAHHGKNEFGSPVTPRLLEAEILHRVDDLDAKINMMTSHLQDVEPGEYTP
KIMGLEGRSFYHPSDDYYQNI
NT seq
966 nt
NT seq
+upstream
nt +downstream
nt
atggataagcgcttaatttatgaaattcctcaaaatgaaaaatttgatctctacattttg
ataaaaaatgctaatgtacgtactgaccgcaatgggcgcgacttcattgcatttaccttc
caagataagtcagggactattgatggcatgtattggagtgctatggaagatgaagtggag
gcctttcaaagtggtcgggtggtccgcttaaaggggcaccgggaattatataatggccaa
ccccaagtgaagatttcgggcttgcgtctagcccatgatggcgaacccaatgacccgagt
ttgtttattgctgacggtcccatgaaggtagaagatatgaaggctgaaattgaagcgggg
atcaaaagcattatgcatccggtactcaagaaaattgtgggcagcatcatgactgaatac
gatgatattttctaccaatatccagctgctaaacgccaccaccatgcctttgttggtgga
ttagccttccacaccgtttccatgttacgcctggctcaagcaattgctaaactataccct
aatgtggataaaagcttgctttatgccggggttatcctccatgatgccgctaaggtgatt
gaatttgtggatcctttaagtggagattattctattgaggggaatcttattggtcatatc
tctctaatggggcaaaaaatttccctcaccgcagaacagttaggctaccgtcaagatgaa
gaagcagtggtcttacttaaacatatgattcttgcccaccacgggaagaatgaatttggt
agtccggtaaccccacgtctattggaggctgaaatccttcaccgggtggatgatttagat
gccaagattaacatgatgaccagtcacttacaggatgttgagcctggtgaatatacacca
aaaattatgggcttagaaggacgttctttctaccatccgagtgatgactattatcaaaat
atttaa
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