Aerococcus loyolae: CJ190_007085
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Entry
CJ190_007085 CDS
T09408
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
aloy
Aerococcus loyolae
Pathway
aloy03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
aloy00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
CJ190_007085
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aloy03021
]
CJ190_007085
03400 DNA repair and recombination proteins [BR:
aloy03400
]
CJ190_007085
Enzymes [BR:
aloy01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
CJ190_007085
Transcription machinery [BR:
aloy03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
CJ190_007085
DNA repair and recombination proteins [BR:
aloy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
CJ190_007085
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
INTS7_HB
Motif
Other DBs
NCBI-ProteinID:
WIK92126
LinkDB
All DBs
Position
complement(1578005..1578949)
Genome browser
AA seq
314 aa
AA seq
DB search
MIEIEKPNIETIETSEDNKFGKFAVEPLERGYGTTLGNSLRRVLLSSLPGTAVTSIKIEN
VLHEFSTIPGVREDVTQIVLNIKQLALKLYDVDEKDIELDITGPAEVTAADITADADFDV
LNPDLHICSLAEGAKIHILMHVKNGRGFVRAENNKTDDMPIGVIPVDSIYTPIKKVNYQV
ENTRIGEVNEYDKLTFDIWTDGTIAPKEALSLAAKVLTEHLAIFVSLTDEAQEAEIMVEK
EETQKEKMLEMTIEELDLSVRSYNCLKRAGINTVEELTQKTEAEMMKVRNLGRKSLDEVK
GKLDALDLSLKDDD
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atgatcgaaattgaaaagccaaatatcgaaaccattgaaaccagcgaagataataagttt
ggtaaattcgctgtcgaaccactagagagaggttatgggacgactttaggtaattccctt
cgtcgtgtacttttatcctcattaccagggacagctgttacatcgataaagattgaaaat
gttttacatgaattttcaactattccaggagtacgtgaagacgttacccaaattgttctt
aatattaagcaacttgcgcttaaattatacgatgtcgatgaaaaggacattgaacttgat
atcactggaccagctgaagtaactgctgcagatattactgctgatgcggacttcgatgtt
ttgaatccagatctacatatttgttctttggctgaaggtgccaaaatccatattctgatg
catgttaagaatggacgtggctttgttcgtgctgaaaacaacaaaacggacgacatgcct
attggtgtcattccggtcgattcaatctatacaccaatcaagaaggttaactaccaagta
gaaaatacccggatcggtgaagtcaatgagtacgataaattgactttcgatatttggacg
gatggaacgattgcccctaaggaagctttaagcttagcggctaaagtcttaacggaacat
cttgcaatctttgttagcctaactgatgaagctcaagaagctgaaatcatggttgagaaa
gaagaaacacaaaaagaaaaaatgctcgaaatgaccattgaggaattagacttatcggta
cggtcctataactgcttgaaacgggcagggattaacaccgttgaagaacttactcaaaag
actgaagcagaaatgatgaaggtccgtaacctaggacgtaaatcattagacgaagtcaag
ggcaaactcgacgcattagacttatctttaaaagatgatgactaa
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