Aerococcus loyolae: CJ190_007500
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Entry
CJ190_007500 CDS
T09408
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
aloy
Aerococcus loyolae
Pathway
aloy03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aloy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CJ190_007500 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aloy03021
]
CJ190_007500 (rho)
03019 Messenger RNA biogenesis [BR:
aloy03019
]
CJ190_007500 (rho)
Transcription machinery [BR:
aloy03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
CJ190_007500 (rho)
Messenger RNA biogenesis [BR:
aloy03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
CJ190_007500 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
S1CSD-TOTE-2
OB_RNB
Mug135_C
ATPase_2
NACHT
NB-ARC
Motif
Other DBs
NCBI-ProteinID:
WIK92203
LinkDB
All DBs
Position
complement(1655977..1657278)
Genome browser
AA seq
433 aa
AA seq
DB search
MTKKKAKFEKDELLTWEDLEGLTLKQIYDYAKEYKIPYYSQMNKKELILAVIRAQEKSQG
YFSVEGILDITGNEFGFLRPINYSPSQEDIYISNSQMRRFGLRNGDLVSGTARPPKNNER
YLGLMHVYGVNGKDPEEAKQRSHFPALTPIYPDQALRLESAPNRLSTRMIDLIAPVGFGQ
RGLIAAPPKAGKTVLLKEIANGISENYPEAELIILLIDERPEEVTDLERSVQGEVVSSTF
DQKPDNHVRVAELVLERARRLVEDKRDVIVLMDSITRLARAYNLIEPPSGRTLSGGLDPA
ALYGPKRFFGSARNIEDGGSLTILATALTDTGSRMDDMIYEEFKGTGNMELHLSRQLAER
RIFPAIDIKKSGTRKEELLLSDQALEALWQLRQGMQGNSQEYTESFIHELSQTKTNQQFI
ERLASFGQALKEK
NT seq
1302 nt
NT seq
+upstream
nt +downstream
nt
atgactaagaagaaagcaaaatttgaaaaagatgagctcttaacctgggaagatctggaa
ggcctcaccctcaagcaaatctatgactacgccaaggaatataagattccttactacagt
caaatgaataaaaaggaactgattctagccgttatccgggcccaagaaaagagccaaggc
tatttttcagtggagggcatcctggatattaccggtaatgaatttggtttcttgcgcccg
attaactattcccccagtcaagaagatatttatatctctaattcccagatgcgccgcttt
ggcttacggaatggggacctagtctcagggactgcccggccacccaagaataatgaacgt
tatttgggcttgatgcatgtctatggggtcaacggcaaggatcctgaagaagccaaacag
cgttcgcacttcccagctttaacgcctatctaccctgaccaggccttgcgcttagaatcg
gcacctaaccgcctatcgactcggatgattgacctcatcgctccggtcggttttggccaa
cggggcttaattgcggcccctcccaaggctggtaagaccgtcctattaaaagaaatagcc
aatggtatcagtgaaaactacccggaggcagaattgattattctcttaattgatgaacgc
cccgaggaagtgactgacctcgagcgcagtgttcaaggggaagtggtcagctcgaccttc
gaccaaaaacccgacaaccatgtccgagtagctgaattggtcttagaacgggcccgacgt
ttggtcgaagataagcgggatgtcattgtcttgatggattccatcacccgtttagcccgg
gcctataacttgattgaaccgccttctggtcggaccttatccggaggattggatccggct
gccttatatggtcccaagcgcttctttggttccgccagaaatattgaagatggcggatca
ctgaccatcctagctaccgccttaaccgatactgggtcgcggatggatgatatgatttat
gaagaattcaagggcaccggcaatatggaattacacctgtcccggcaactggccgagcgc
cggattttccccgccattgatattaagaagtcaggcacccgcaaagaagaactgctctta
agtgaccaagccctagaagccctctggcaactccgccaaggcatgcaggggaatagccaa
gagtataccgagagcttcattcatgagttatcgcaaaccaagactaaccaacaatttatc
gaacgcttggcttcttttggtcaagctttgaaagaaaaataa
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