Aerococcus loyolae: CJ190_009165
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Entry
CJ190_009165 CDS
T09408
Symbol
rpoN
Name
(GenBank) RNA polymerase factor sigma-54
KO
K03092
RNA polymerase sigma-54 factor
Organism
aloy
Aerococcus loyolae
Pathway
aloy02020
Two-component system
aloy02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
aloy00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
CJ190_009165 (rpoN)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
CJ190_009165 (rpoN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aloy03021
]
CJ190_009165 (rpoN)
Transcription machinery [BR:
aloy03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
CJ190_009165 (rpoN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_CBD
Sigma54_DBD
Sigma54_AID
MarR_2
HTH_3
MarR
Sigma70_r4
DUF7181
HTH_Crp_2
DUF6791
HTH_5
HTH_31
HTH_38
Motif
Other DBs
NCBI-ProteinID:
WIK92510
LinkDB
All DBs
Position
2021116..2022435
Genome browser
AA seq
439 aa
AA seq
DB search
MAIHYRTQQNIKAKLSPYVKNQLAQSSQLLQKNQLDLATALYHYYESNPFIEITENQQVS
ATFTHDSSDYSLAETLADPNALSLDEYLYSQLNESQLSSYDKRQVLYLIGQLDQDGYYRK
EDQATCQLFAWRQSELESYLRILQGLDPTGIGARNLKECLALQAKNLPNSQLLERLINEH
LEDLAQGKFEIIAEQEHNSVDQIKASFSQIQRLEPRPARNFSFETPAYTLPDIIVSVEKG
ELAIQVAKDYLPKITFNQNYYQAMQSKNLDQTTQDYLKEKKLEFDWLVFSLKKRDQVLLK
ISQHLIHYQAAYLNQESNQLRPLTQKELAKALDYDQSTISRAITDKYLQYNQRILSFQDL
IAQKISAKGKPLTRKQAEKLIRQLIAKEYPNHPLSDQAISEYLAMHDYYLARRTVAKYRQ
ALGIPGARARKRQKLTLKK
NT seq
1320 nt
NT seq
+upstream
nt +downstream
nt
atggccattcattatcgcacccagcaaaatatcaaggcgaaattatccccctatgtcaaa
aatcaactggcccagtcctcccaactcctacaaaaaaatcagctcgacctcgctactgcg
ttgtatcactactatgaaagcaatccctttattgaaatcacagaaaatcagcaagtctca
gcgaccttcacccacgactcaagtgactattccttagccgagactttggctgatcccaat
gccttatcgctcgatgaatatttatatagtcaactcaatgaaagccagttaagcagctat
gacaaaagacaagtcctgtatttaattggccaattagatcaggacggctattatcgcaag
gaagaccaggctacctgccaactctttgcttggcgccaaagcgaattagaaagctattta
aggatcctacagggtcttgaccccacaggaattggggcacgaaatttaaaagaatgtctg
gctctacaagcaaaaaaccttcctaatagtcaattactggaacgtttaattaatgagcac
ttagaagacctagcccaaggaaagtttgaaataatcgctgagcaagaacacaacagtgtc
gaccagatcaaagccagcttttcacagattcaaaggttggagccccgacccgcccgtaat
ttttcctttgagacgcctgcttacaccctgcccgatatcattgtcagcgtcgaaaagggg
gagctagccatccaagtcgctaaagactacctccccaaaatcacttttaaccaaaattat
taccaagccatgcaaagtaaaaacctggaccaaaccacccaggactatctcaaagaaaaa
aagctagaatttgactggctagtcttttctttaaagaaaagagaccaagtgctgttgaaa
attagccaacatctgatccattaccaggctgcttatttaaaccaggagagcaatcagctc
cgccccctgactcaaaaagaactggcaaaagccttggattatgaccaatcaaccatttct
cgggctattacggacaaatacctgcaatataatcagcggattttaagttttcaggacctc
atcgcacaaaagatttccgctaaaggtaagccacttacgcgaaaacaagcggaaaaatta
attaggcaattgattgctaaagaataccctaatcaccccctaagtgaccaagccattagc
gagtacttagcgatgcatgattattatttagctcgacggacggttgccaagtaccgccaa
gccctgggcatccctggggcgcgagcgcgaaaaaggcaaaaactcactcttaaaaaataa
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