Poseidonibacter parvus: LPB137_03315
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Entry
LPB137_03315 CDS
T04722
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
alp
Poseidonibacter parvus
Pathway
alp03030
DNA replication
alp03430
Mismatch repair
alp03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
alp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LPB137_03315
03430 Mismatch repair
LPB137_03315
03440 Homologous recombination
LPB137_03315
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
alp03032
]
LPB137_03315
03400 DNA repair and recombination proteins [BR:
alp03400
]
LPB137_03315
Enzymes [BR:
alp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LPB137_03315
DNA replication proteins [BR:
alp03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
LPB137_03315
DNA repair and recombination proteins [BR:
alp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
LPB137_03315
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
RNase_H_2
DEDDh_C
Motif
Other DBs
NCBI-ProteinID:
APW64944
UniProt:
A0A1P8KK78
LinkDB
All DBs
Position
complement(685784..686416)
Genome browser
AA seq
210 aa
AA seq
DB search
MFNKFLKNWNRKKLKDKKYDFLFDEPLNNEYVCLDCETTGLSPRKDEILSIGAVHIKDNK
VIMRETFNIFVKPSKNISAESIKIHHIRPIDLENAVSPKKAILKLLDFIGSRPIVGYYIK
FDIAMISKYTKQYIGINLPNESIEVSSMFFKSKKKTSEYEFIDLKFDTIMKELDIPSLGK
HDALNDAIMTSMMFLKLRNLTPAKTTFYTS
NT seq
633 nt
NT seq
+upstream
nt +downstream
nt
atgtttaacaagtttttaaaaaattggaatagaaaaaaattaaaagataagaaatatgac
ttcttatttgatgaacctttaaataatgaatatgtatgtctagattgtgagacaacaggg
ttaagcccaagaaaagacgaaatactttctattggtgcagttcatataaaagataataag
gtaattatgagagaaacgtttaatatttttgttaagccttcaaaaaatattagtgctgaa
tctattaaaattcatcatatacgtcctatagatttagaaaatgcagtaagtcctaaaaaa
gcaatactaaaattattagattttattggctctcgtccaatagttggctattacataaaa
tttgatatagcaatgatctcaaaatacactaaacaatatattggaataaacttaccaaat
gaaagtattgaagtatcatcaatgttttttaaatcaaagaaaaaaactagtgaatatgaa
tttattgatttaaaatttgatactattatgaaagaactagatattccatctttaggaaaa
catgatgctttaaatgatgcaattatgacatcaatgatgtttttaaaacttagaaactta
actccagcaaaaacaacattttacacaagctaa
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