Poseidonibacter parvus: LPB137_03890
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Entry
LPB137_03890 CDS
T04722
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K10857
exodeoxyribonuclease X [EC:3.1.11.-]
Organism
alp
Poseidonibacter parvus
Pathway
alp03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
alp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
LPB137_03890
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
alp03400
]
LPB137_03890
DNA repair and recombination proteins [BR:
alp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
LPB137_03890
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RNase_T
ExoX-like_C
DNA_pol_A_exo1
QSregVF_b
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
APW65037
UniProt:
A0A1P8KKF9
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All DBs
Position
complement(795431..796177)
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AA seq
248 aa
AA seq
DB search
MSKFIIFDTETTGFYEEDRIIEVGAMIIDDNDVQILDELCSTDVPIKMEATLIHKISQEM
IKDKCKFTQTKFYKRLLELNNEQNYLIAHNMPFDLGMLEKEGFVNKFRIIDTLRVAKHLL
VEGKSIALPYLRYSLKLYEEEEKEALKYGVVMKEHTAIGDVLVTKLLFSKLQILTKEKFP
NENAIEKMLEFTKTPILQKNFKYGKYKGKKISDIYNNDIEYINWLKNNIELDMDIKYTFD
TLEKKKKS
NT seq
747 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaaatttataatatttgatactgaaactactggcttttatgaagaagatagaatc
atagaagttggagcaatgattattgatgataatgatgtccaaatcttagatgaactttgt
agtactgatgttcctataaaaatggaagctactttaatccataaaatctcacaagagatg
ataaaagacaaatgcaaatttactcaaacaaaattttataaaagattacttgaattaaat
aatgaacaaaactatttaatagctcataatatgccatttgatttaggaatgttagaaaaa
gaaggttttgtaaataagtttagaattattgatacgttaagagttgctaagcatctttta
gtagagggtaaatctatagcacttccatatcttagatattcacttaaattatatgaagag
gaagaaaaagaagcattaaaatatggtgttgttatgaaagagcatacagcaattggtgat
gtattagttacaaaactattattttcaaagcttcaaatactaacaaaagaaaaattccca
aatgagaatgctatagagaaaatgctagagtttactaaaacaccaatattacaaaagaat
ttcaaatatggtaaatataagggcaaaaaaataagtgatatttataacaatgatatagaa
tatataaattggttaaaaaataatatagaacttgatatggatataaaatatacttttgat
actcttgaaaaaaagaaaaaaagctag
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