Poseidonibacter parvus: LPB137_03965
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Entry
LPB137_03965 CDS
T04722
Name
(GenBank) pseudouridine synthase
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
alp
Poseidonibacter parvus
Brite
KEGG Orthology (KO) [BR:
alp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
alp03016
]
LPB137_03965
Enzymes [BR:
alp01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
LPB137_03965
Transfer RNA biogenesis [BR:
alp03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
LPB137_03965
Prokaryotic type
LPB137_03965
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
APW65051
UniProt:
A0A1P8KKH7
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All DBs
Position
813208..814209
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AA seq
333 aa
AA seq
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MIKREFLQDHKSLDFKFYQNVDDFIVEEVPIKFAGRGNFIIAKIKKQKLGTWDLIESLAK
GLRIYDNELGYAGLKDKNATTTQYISIPKKYSKDLKQFRHNKIKILETTLHGSKLNIGDL
IGNKFEINLHEVQAQDVGKIEKLLKQISKVGMPNYFGFQRFGYDGLENLEKARKYIYEDY
QIKDRKISKMLVAAYQSDFFNKWLVERLKQSDDSFKAMDGDVFRDYREDKFFTPKNFTEI
MQKDFEDKKIVPTGLLPGQKAFRSIKDARKIEEMFDDTYIKEKGYRRDAIVYPSDISVSF
DKNTNKCKVKFTLPKASYATVLIENIANRNLKA
NT seq
1002 nt
NT seq
+upstream
nt +downstream
nt
atgataaaaagagagtttttacaagatcacaaaagtttagattttaagttttaccaaaat
gttgatgattttattgttgaagaagttcctattaaatttgctggtcgtggtaactttata
attgcaaaaataaaaaagcaaaagcttggaacttgggatttaatagaaagtttagcaaag
ggtttacgaatatatgacaatgaattaggatatgcaggacttaaagataaaaatgcgact
acaactcaatatatttcaattcctaaaaaatattcaaaagatttaaagcaatttagacac
aataaaattaaaatattagaaacaacacttcatggatctaaactaaatattggtgattta
attggaaataagtttgaaataaatttacatgaagttcaagctcaagatgttggaaaaatt
gaaaaacttttaaagcaaatttcaaaagtcggaatgccaaattattttggtttccagaga
tttggttatgatggcttagaaaacttagaaaaagctagaaagtatatttatgaagactac
caaataaaagatagaaaaatatcaaaaatgcttgtagctgcttatcaaagtgattttttt
aataaatggttagtagaaagacttaaacaatcagatgatagttttaaagccatggatggt
gatgtatttagagattatagagaagataaattctttactcctaaaaacttcacagagata
atgcaaaaagattttgaagataaaaaaatagtaccaacaggattattgcctggtcaaaaa
gcatttagaagtattaaggatgctagaaaaattgaagaaatgtttgatgatacttatatc
aaagaaaaaggttacagacgtgatgcaatagtatatccaagtgatatttctgtaagtttc
gataaaaatactaataaatgtaaagttaaatttacattaccaaaagcttcttatgcaact
gttttaattgaaaacattgcaaacagaaacttaaaagcttaa
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