Poseidonibacter parvus: LPB137_04280
Help
Entry
LPB137_04280 CDS
T04722
Symbol
glyA
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
alp
Poseidonibacter parvus
Pathway
alp00260
Glycine, serine and threonine metabolism
alp00460
Cyanoamino acid metabolism
alp00630
Glyoxylate and dicarboxylate metabolism
alp00670
One carbon pool by folate
alp00680
Methane metabolism
alp01100
Metabolic pathways
alp01110
Biosynthesis of secondary metabolites
alp01120
Microbial metabolism in diverse environments
alp01200
Carbon metabolism
alp01230
Biosynthesis of amino acids
alp01240
Biosynthesis of cofactors
alp04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
alp00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
LPB137_04280 (glyA)
09102 Energy metabolism
00680 Methane metabolism
LPB137_04280 (glyA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
LPB137_04280 (glyA)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
LPB137_04280 (glyA)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
LPB137_04280 (glyA)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
LPB137_04280 (glyA)
Enzymes [BR:
alp01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
LPB137_04280 (glyA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
DegT_DnrJ_EryC1
Beta_elim_lyase
Motif
Other DBs
NCBI-ProteinID:
APW65112
UniProt:
A0A1P8KKN0
LinkDB
All DBs
Position
complement(873779..875041)
Genome browser
AA seq
420 aa
AA seq
DB search
MNYISNANLKEADSEVFEICENELERQTDHLEMIASENFTSPAVMQAMGSVFTNKYAEGY
PYKRYYGGCEQADKVEQLAINRACEIFGCNYANVQPHSGSQANGAVYAALLKAGDKILGM
DLSHGGHLTHGSKPSFSGKNYTPFYYGVELDGRINYERVMDIAKIVQPKIIVCGASAYAR
EIDFVKFREIADAVGAILFADIAHIAGLVAAGEHMSPFPYADVVTTTTHKTLRGPRGGMI
MCNDEDIAKKLNSAIFPGLQGGPLVHVIAGKAVAFKEILSPAWKDYAKQVKANAKVLGEV
LVSRGYDIVSGGTDNHLVLVSFLNKEFSGKDADAALGNAGITVNKNTVPGETRSPFVTSG
IRVGSPALTARGMKEKEFEIIANKMCDVLDDIENTKLQETIANELKELASNFVIYNQSTY
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atgaactatatatcaaacgcaaacctaaaagaagcagattcagaagtatttgaaatatgt
gaaaatgaattagaaagacaaacagaccatttagagatgattgcaagtgaaaactttaca
tctccagcagtaatgcaagcaatgggttctgtatttactaataaatacgcagaaggttac
ccttataaaagatattatggtggttgtgagcaagctgataaagttgagcaacttgcaata
aatagagcttgtgaaatctttggatgtaattatgcaaatgtacaacctcattcaggttct
caagctaatggtgcagtatatgcagcactattaaaagctggtgataaaattcttggtatg
gatttatctcatggtggacatttaactcatggttcaaaaccatcattttcaggtaagaac
tatactcctttttattatggtgtagaattagatggaagaattaattatgaaagagtaatg
gatattgctaaaattgttcaaccgaaaattattgtttgtggtgcttctgcatatgctaga
gaaattgattttgttaaatttagagaaattgctgatgcagttggagctattttatttgct
gatattgcacatattgcgggattagttgcagcgggtgagcatatgagtccattcccttat
gcagatgtagtaacaactacaacacataaaacacttcgaggacctagaggtggaatgata
atgtgtaatgatgaagatatagcaaagaaattaaactctgctattttcccaggattacaa
ggtggaccattagtacatgtaattgctggtaaagcagtagcatttaaagaaattctaagt
cctgcttggaaagattacgcaaaacaagtaaaagcaaatgcaaaagttctaggtgaagta
ctagtttcaagaggatatgatattgtatctggtggaacagataatcacttagtattagta
tcatttcttaataaagaattctcaggaaaagatgcagatgctgcattaggaaatgctgga
attactgtaaataaaaatacagtaccaggtgaaacaagatctccatttgtaacatcaggg
attagagtaggatctcctgcattaacagcacgtggaatgaaagaaaaagagtttgaaatc
attgcaaataaaatgtgtgatgtattagatgatattgaaaacactaaattacaagaaaca
attgcaaatgagttaaaagaacttgcatctaattttgtgatttacaatcaatctacttac
tag
DBGET
integrated database retrieval system